Protein

Genbank accession
CAB4177652.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MGRRSDVAKFIANRTVDILWSDLSLSGEANTELSVPDEYYEEFSLVLASEYVTSAGVTTNRLKETLEDYNDATDAGELAYFWTVPSEKDALSDRIAWLEDNGLPTTNTINVGTTTTSAPGGNAVVTNVGSTSNAIFNFTIPRGAQGPTGATGAAGATGAAGATGATGATGATGPRGYQGFAGADGDDATVTVGTTTTLPQGQPASVVNVGTANDAILNFSIPRGTKGDDGDTGPAGTAGADGADGADGQGFVYNGNWESTSTYNEYDVVTYDGSAWITPSTTINEVPGIAGPWYLFVQKGDKGDPGDPGTPGADGADGADGADGAAGAGLSVKGTVSTIGALPSTGNTIGDGYIVTANGHLYVWSGSSWTDAGTIVGPKGDQGDPGAAGATGATGPAGPTGLTGATGATGSQGIQGIQGNTGATGATGPTGATGPAGVAGATGATGAAGATGATGPSGVISVTAPILNGGTSTAASLSLDVGTSATQVSAGNHTHSYASTSHATTHNAGGTDALAIDAAAGTGSLRTLGSTATSAAAGNHTHVGGSGDVVGPSSSIDNALPRFDLTTGKLIQGSSIIVNDSNNLFVPTSVVQSPKAVTESSNTFTINTSNSNYITGITVPAGTAPTVVSTASVSFGSATTGTLTFGTRATGDVIIVIVGSDGSVPAITSSGWTTIASSSANTTYALVAYKTMGATADTSISFSGLSTASTASSMVVRNGALNVYTAAMKESGNGQITPPAVLTVYGNELVVTLAGMDDFATAGTVSAAPSGYTNLTSAVSTVSGFATMISSKVVSAPQTYEAPGAYTTTTSDTSASTTVTFAPINNSKTIALTGAPSQAITGYSNAVAQTTVIDYSNLGSPVTWSGVSWSGGVAPSIYATGIVTLVTLDGTTYKAAFVDGY
Physico‐chemical
properties
protein length:901 AA
molecular weight: 88163,68340 Da
isoelectric point:4,17070
aromaticity:0,06326
hydropathy:0,00289

Domains

Domains [InterPro]
IPR050149
142–458
IPR050149
IPR008160
142–187
IPR008160 IPR036573 IPR008160
CAB4177652.1
1 901
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4177652.1 [NCBI]
Genbank nucleotide accession
LR796956 [NCBI]
CDS location
range 30226 -> 32931
strand +
CDS
ATGGGGAGAAGAAGCGACGTGGCTAAGTTTATTGCAAACCGCACAGTTGATATTCTGTGGAGCGACCTATCGCTAAGTGGCGAAGCAAATACGGAATTGTCAGTACCAGATGAGTACTATGAAGAGTTCAGTCTTGTTCTTGCCTCAGAGTACGTCACCAGCGCTGGTGTAACCACTAACCGCCTCAAGGAAACGCTTGAGGACTACAACGACGCAACCGATGCTGGAGAACTAGCCTACTTCTGGACAGTTCCATCAGAAAAGGACGCGCTTAGCGATCGTATTGCGTGGCTTGAGGACAATGGTCTGCCAACTACTAATACAATTAATGTTGGCACGACTACAACTAGTGCCCCTGGCGGAAATGCAGTAGTAACTAACGTTGGAAGCACAAGTAATGCAATCTTCAACTTCACGATCCCTCGTGGCGCACAGGGTCCAACTGGAGCAACAGGCGCTGCAGGCGCAACTGGTGCTGCTGGGGCAACTGGAGCGACTGGAGCAACTGGCGCAACAGGTCCGAGAGGATATCAGGGATTTGCTGGTGCAGACGGAGATGATGCAACAGTCACAGTTGGAACAACTACCACACTTCCGCAGGGTCAACCTGCGTCTGTGGTCAATGTTGGCACGGCAAATGACGCAATTCTTAACTTCTCTATCCCACGAGGAACTAAGGGGGATGATGGAGACACTGGTCCCGCTGGTACTGCTGGAGCAGACGGGGCGGATGGCGCGGATGGGCAAGGATTTGTCTACAACGGTAACTGGGAATCAACTTCTACCTATAATGAATATGACGTTGTTACTTATGATGGAAGTGCATGGATCACTCCAAGCACAACGATTAACGAAGTTCCAGGAATTGCTGGTCCGTGGTATCTATTTGTACAAAAAGGCGATAAGGGTGATCCTGGAGATCCAGGAACGCCTGGAGCGGATGGCGCAGATGGTGCGGACGGCGCAGATGGTGCCGCTGGCGCTGGTCTAAGCGTTAAGGGAACTGTTTCCACAATTGGCGCTCTTCCATCTACTGGGAATACTATTGGCGATGGATACATCGTTACCGCTAATGGACATTTATATGTGTGGTCTGGAAGTTCTTGGACTGACGCTGGAACAATTGTAGGACCTAAGGGTGACCAAGGAGATCCTGGCGCGGCTGGCGCAACTGGAGCAACTGGTCCTGCTGGTCCTACTGGTCTTACTGGTGCTACGGGGGCTACTGGGTCTCAGGGTATTCAGGGTATTCAGGGTAATACAGGGGCTACGGGCGCAACTGGACCTACGGGCGCAACTGGACCTGCGGGCGTTGCGGGTGCAACTGGAGCAACTGGTGCTGCAGGTGCAACTGGAGCAACTGGACCTAGCGGTGTCATTTCGGTTACTGCGCCAATTCTTAATGGTGGAACATCAACGGCGGCATCTCTAAGTCTTGATGTTGGAACTTCAGCAACACAGGTTTCAGCAGGAAACCATACGCATTCATACGCATCAACCAGCCATGCTACAACCCATAATGCTGGCGGGACTGATGCCCTTGCAATTGACGCGGCTGCTGGAACTGGATCCTTGCGAACACTTGGCTCTACAGCCACATCCGCAGCCGCTGGTAACCACACACATGTTGGCGGATCAGGAGATGTAGTAGGACCATCTTCGTCTATTGATAATGCACTGCCGCGCTTTGACCTAACGACTGGCAAACTGATTCAAGGTAGTAGCATTATTGTCAATGATTCAAATAACCTATTTGTCCCTACATCTGTTGTTCAGTCTCCAAAGGCAGTAACAGAATCAAGTAACACATTTACAATTAACACGTCAAACTCAAACTACATTACTGGTATCACTGTTCCTGCTGGAACTGCCCCAACAGTTGTTTCTACAGCGTCTGTATCATTTGGCTCGGCAACTACAGGGACATTAACTTTTGGAACGCGAGCAACTGGGGATGTCATTATAGTTATTGTTGGCTCAGACGGGTCTGTTCCAGCAATTACTAGTTCTGGGTGGACGACTATTGCAAGTTCATCTGCAAACACTACGTATGCACTCGTCGCGTATAAAACAATGGGCGCGACAGCAGACACTAGTATTTCGTTCTCAGGTCTTTCTACTGCGTCAACTGCATCTTCAATGGTCGTACGAAACGGAGCGCTTAACGTATACACCGCGGCTATGAAGGAGTCAGGAAATGGTCAAATCACTCCGCCCGCTGTATTAACTGTTTATGGAAATGAACTTGTCGTCACTCTTGCTGGCATGGATGACTTCGCAACTGCTGGAACTGTAAGCGCCGCACCTTCAGGATACACAAACCTTACAAGTGCGGTATCAACTGTTTCTGGATTTGCAACGATGATATCTTCAAAGGTAGTCAGTGCCCCTCAAACATATGAGGCTCCAGGAGCATATACTACGACCACAAGCGATACTAGTGCAAGCACAACTGTTACGTTTGCGCCAATAAATAACAGCAAAACAATTGCTTTGACAGGAGCGCCAAGCCAAGCAATTACTGGGTATAGCAATGCGGTGGCGCAAACAACTGTCATTGACTATTCAAATCTTGGCTCACCAGTAACATGGTCTGGCGTTTCTTGGTCTGGCGGAGTTGCGCCATCAATTTACGCAACGGGGATTGTTACGCTTGTAACCCTAGACGGAACTACATACAAGGCGGCATTTGTAGATGGTTACTAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3b771e0ff8df42c17767a110b538192fb4355b4304f2232cc5f48885b06c7e05
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2688
Evidence 0,2688
Download PDB

Literature

No literature entries available.