Protein

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Genbank accession
ATW58378.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MVDIIKQDMTDIWAVAGDVVAPDSAKVRAGWGVEAVPRQWWNWFENRQDSNIAYMLQKGIPEWDQFTEYLTNKSYVQRNNIVYKCILTGVNKDPATTPANWVKAFPESSAYLETIRPLAVSNNSMAFIDGTGTAQNTPSTAYGRSVLNVADAAAARTLTGSQQANSNLTALSAVAASTNALPYFTGTSTMGTTVLTQAARDILAGVDYAAIRATLQLTSAATTQLQANALERDISKIMRVGAFGLGSFLDLRTHVYATGVPSDCFSAGTVFGLVNGGVGGLEIPGLSGTWYGVLQVNGHSVDGTAIGAVSRVFITNNGRVFSQAAASASAWGTWAESWTNSNLVKTASATDNTAGRMLKVGDFGIGSQGVLVGDINALSNTGTGFYLLGIPFTGSPIAGSAATVIHQALDNERTQIATTSGTAVRTFIRKYASGAWQPWAEIYNSSNTQAIVDQVTLGIQPTLDAKLDKAGGTMTGQLLVPSVELGSKTAASTPFLDFNSSGLGVDYDARIFGSNGTSTTGNGRLNYTAAGHTFTGLITGTITTAQGLTGNINISQVNSLQASLDGKMPTGGGAYTPTLHAVRAVSTMDAGIGQGVIMGWNESGTGAAAFINNQGGGSGGFVFRNVNVSNTVETGRVTFGGTGGITCVGLTSNGDIYATSSVISANHLYAGGANGARFHSDGNVWGSVWGGYLSNWMFANLVYKSTLQSDTVNQVPNGAIGSYAFCYTQVGATNGQQVGSGNLLYGFAAGQGGQNPPGTWRCMGDVSAGQRTLFQRVA
Physico‐chemical
properties
protein length:778 AA
molecular weight: 80873,13940 Da
isoelectric point:6,19087
aromaticity:0,08869
hydropathy:-0,01105

Domains

Domains [InterPro]
DC_0362
RBD
1–485
DC_0362 DC_1924
cd19958
STR
374–443
cd19958 G3DSA:6.20.70.20
ATW58378.1
1 778
Architecture
RBD
STR
RBD
RBD
RBD 1-373 | STR 374-443 | RBD 444-485 | RBD 608-778
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATW58378.1
1 778
Domain Start End Length (AA) Confidence
N-terminal 1 541 541 0,3618
Central domain 542 740 200 0,1790
C-terminal 741 778 37 0,9994
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-541
Central
542-740
C-terminal
741-778

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage ventosus
[NCBI] 		2048980 Uroviricota > Caudoviricetes > Vandenendeviridae > Ventosusvirus > Ventosusvirus ventosus
Host Pseudomonas syringae pv. avii
[NCBI] 		663959 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
2f3fd6321d2e526a71e538ca840136f73ba898989fe27b06dbf4499f5b9d2742
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6668
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50