Protein

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Genbank accession
AUS01365.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MGFFMSDINFCNTKEQLNHLGEVVTGKVDGSPTGADIDTSTLTYTGQVRKTLPALEGEYEQSIADKEAEADAAIDAYRLLNKGPYTSGITLESKFEYITYNGESYFATNPPYTTTATLPDADGNLFVGGYVNESLATQIAETVLDENISTYTDIVYKSSGGNSAIENMIANASLGEKSSTPGTRWIRVSTANGDISDFQYQESISIADLSDISRGKGSISDSIDVSNEIISAILSYTNVAGSAIFTIPSDVYFDAETLYAGVPAGSGIVAQSIEDGTSYAGYSSKANWSMFGDTEDNDSRNVISSGYNALINLFNAQLPNTGVGGVGQSDSSIDGRCSVTFQAGYQTVNGRQVRANTSRLQRYQTGGVGVIHLGLQHPTETGAGTRTLFDFDSNGNASFGGSATNDAYNLLVYPQNTNAPALDKRTTLALRNVQPSGNGCRMEMVSRNAADTNSLAIDYDGNDLLIGAYDSLEGGYTGNIDRLFLGRETPTGDASRLVIYDDENRGQIFARNTLANGLTRTMLALQAGNSTAAAYNWCNFFDTFNSISRFAVDGLGNVTANSYTPFTGCHLFFSPNDIDVGMPVDLVNCDQVDYITYPDPDSEESSVIKLNGTVSPSGAMSKVCVGVVHSSREMEGGYMIMVAAVGDNRSGELKGFRVNDSNGSVEAGDVLCTSSVVGELMKIPDGSPESVVRFKALSGPDMDGFVYGYF
Physico‐chemical
properties
protein length:710 AA
molecular weight: 75635,22800 Da
isoelectric point:4,30944
aromaticity:0,09014
hydropathy:-0,24282

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS01365.1
1 710
Domain Start End Length (AA) Confidence
N-terminal 1 212 212 0,9641
Central domain 213 411 200 0,5538
C-terminal 412 710 298 0,8676
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-212
Central
213-411
C-terminal
412-710

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.284.A._10N.286.55.A5
[NCBI] 		1881279 No lineage information
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS01365.1 [NCBI]
Genbank nucleotide accession
MG592654.1 [NCBI]
CDS location
range 23869 -> 26001
strand +
CDS
ATGGGCTTTTTTATGTCTGATATAAATTTTTGTAACACGAAAGAACAACTAAACCATTTAGGTGAAGTTGTCACAGGTAAAGTTGACGGCTCACCGACGGGTGCTGATATTGATACGTCTACACTTACTTATACTGGTCAGGTGCGTAAGACGCTGCCTGCTTTAGAAGGTGAATACGAGCAATCAATTGCCGATAAAGAAGCCGAAGCTGACGCGGCTATTGATGCTTATCGCCTGCTAAATAAAGGACCGTACACATCTGGAATCACATTAGAATCAAAGTTTGAATACATCACCTACAACGGTGAGTCTTACTTTGCTACCAATCCTCCATACACAACAACCGCTACGCTGCCAGATGCTGATGGTAATTTGTTTGTTGGTGGTTATGTTAATGAGTCGCTTGCGACACAAATAGCCGAAACGGTCTTAGATGAAAATATATCAACATACACAGATATAGTTTACAAATCCTCAGGCGGTAATTCTGCGATTGAAAACATGATTGCTAATGCCTCTCTTGGTGAAAAAAGCTCAACCCCTGGGACTAGATGGATTAGAGTATCTACTGCAAATGGTGATATTTCAGATTTTCAATATCAAGAATCTATATCCATCGCAGACTTGTCAGATATATCTAGAGGCAAGGGTTCAATTTCGGATTCTATCGACGTTTCAAACGAAATAATATCAGCAATACTTTCGTACACTAATGTAGCTGGTTCTGCGATATTTACTATCCCATCTGATGTGTATTTCGATGCTGAAACTTTATATGCTGGAGTTCCTGCTGGGTCTGGAATTGTGGCGCAAAGTATTGAGGACGGAACCAGCTATGCGGGATATTCAAGTAAAGCAAACTGGTCGATGTTCGGTGACACAGAGGACAACGATTCCAGAAATGTAATAAGCTCCGGTTATAATGCTTTAATAAACTTGTTTAATGCTCAGCTACCGAATACCGGCGTTGGTGGGGTCGGTCAGTCGGATAGCTCAATAGACGGTCGATGTTCTGTTACATTTCAGGCTGGATACCAGACTGTGAATGGTCGACAAGTTCGAGCTAATACATCTAGATTGCAGAGATACCAAACAGGTGGTGTAGGCGTAATTCATCTAGGATTGCAACACCCAACCGAGACAGGCGCTGGCACTAGGACCCTTTTTGATTTTGATTCAAACGGTAATGCAAGCTTTGGTGGTTCAGCCACGAATGATGCGTACAACCTCCTTGTGTACCCGCAAAACACAAACGCACCGGCACTAGACAAGAGAACAACACTTGCCTTGCGCAATGTCCAGCCTAGCGGCAATGGTTGTAGGATGGAAATGGTATCTAGAAATGCTGCGGATACTAATAGCCTTGCAATTGATTACGACGGTAACGATTTACTTATAGGCGCTTATGATTCGCTTGAGGGGGGTTATACAGGAAACATAGACCGGTTGTTTTTAGGCAGGGAGACGCCTACCGGAGACGCATCAAGACTTGTTATATATGATGATGAGAATAGAGGTCAAATATTTGCGAGAAACACACTTGCTAATGGACTAACTCGGACAATGTTAGCATTACAAGCCGGCAACTCAACCGCAGCGGCATATAACTGGTGCAACTTCTTTGATACGTTCAACAGCATATCTCGATTTGCAGTGGATGGTTTAGGTAACGTTACGGCAAACAGTTACACGCCATTTACGGGGTGTCACTTATTCTTTTCGCCTAATGATATTGACGTTGGTATGCCTGTTGACTTGGTTAATTGTGATCAAGTGGATTACATTACCTATCCAGATCCGGATAGTGAAGAATCGTCCGTTATCAAACTGAATGGTACAGTATCACCAAGCGGTGCTATGTCTAAAGTGTGTGTAGGTGTTGTGCACTCATCGAGAGAGATGGAAGGCGGTTACATGATAATGGTCGCAGCCGTTGGTGATAACAGAAGCGGAGAACTTAAAGGGTTTAGGGTTAACGACTCTAACGGTAGTGTAGAAGCAGGTGACGTTCTATGTACATCTAGCGTTGTAGGGGAGTTAATGAAAATTCCAGATGGCTCTCCAGAGTCTGTTGTTAGATTTAAGGCTTTATCTGGACCTGATATGGATGGGTTTGTATATGGTTATTTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
67889a0c6d3486a37a8396fcf77cf129a6ed654cb09c8ec8e98b0019ded59759
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6092
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank