Protein

View in Explore
Genbank accession
USM81271.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MGAGGFRKNTGRNNTTLPYNVGFLNNVQDTETYNVAVYDELQKVSTATNQMFQAIDEIHEEIDVRIKALNAMNLQFDELENRITTEIETAIADIQTQMGNLSTEDIWDNSVQPPVKLESSMAGFKTSIEGNEVKIQSVEGIVNQQGEEIGLVQTEISNINSSLSSYMKLSDYEATWGVNSNVNGRYAGVKLTNNGTNSQFQVTADKFVVGDGNSGNTPFVFEGGRAKIEFADIKNVNITTAQIANARIQFAQIDNVWITDGQIANLTANKITAGSMSGSNWRLTVGGDFVMGGTGGSQLWMNGNRIDFYDGSGTLRIRIGSW
Physico‐chemical
properties
protein length:322 AA
molecular weight: 35172,55440 Da
isoelectric point:4,54942
aromaticity:0,08075
hydropathy:-0,35683

Domains

Domains [InterPro]
DC_0177
ATT
1–159
DC_0177 IPR015406
USM81271.1
1 322
Architecture
ATT
RBD
ATT 1-159 | RBD 162-304 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP-101114BS3
[NCBI] 		2865792 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USM81271.1 [NCBI]
Genbank nucleotide accession
MZ234015.1 [NCBI]
CDS location
range 73483 -> 74451
strand +
CDS
ATGGGTGCTGGAGGTTTTCGAAAGAATACTGGTAGAAACAACACCACACTTCCGTACAATGTTGGTTTTCTAAACAATGTGCAGGATACAGAAACTTACAACGTTGCCGTCTATGATGAACTACAAAAAGTTAGTACAGCAACTAATCAGATGTTTCAAGCCATTGATGAAATACATGAAGAAATTGATGTTAGGATTAAAGCTCTTAATGCAATGAATCTTCAATTTGATGAACTTGAAAACAGAATTACTACAGAGATCGAAACAGCTATTGCTGATATTCAAACACAGATGGGCAATCTGTCCACTGAAGATATTTGGGATAATTCAGTACAACCGCCAGTTAAGCTAGAAAGTTCTATGGCAGGGTTTAAAACTTCTATAGAAGGTAATGAGGTTAAGATACAATCTGTTGAGGGAATCGTAAACCAGCAGGGAGAGGAAATTGGCTTAGTTCAAACAGAGATCTCTAATATCAATAGCAGCCTATCTTCTTATATGAAGCTATCTGACTACGAGGCTACGTGGGGGGTTAACTCAAATGTCAACGGTAGGTATGCTGGTGTCAAACTAACTAACAATGGCACGAACAGTCAGTTCCAAGTTACGGCTGATAAGTTTGTTGTGGGTGACGGTAACTCAGGTAATACACCTTTTGTGTTTGAAGGAGGTCGAGCTAAGATAGAGTTTGCTGATATTAAGAATGTCAATATCACAACTGCTCAGATTGCTAATGCTCGTATCCAGTTTGCTCAGATAGATAACGTGTGGATTACTGATGGTCAGATTGCCAATCTTACAGCTAACAAGATCACTGCTGGCTCTATGTCCGGTTCTAACTGGAGACTTACAGTAGGTGGAGATTTTGTAATGGGTGGTACAGGCGGTTCTCAGTTATGGATGAACGGTAATAGAATAGATTTTTATGATGGGAGTGGAACTCTTCGCATAAGAATAGGGAGTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fdfe191c29d7628a41a306916ba54127fa57e76ab02987a10db7a7bf5c29fb04
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6590
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Naturally bred epsilon2 phages have an improved host range and effectivity in uropathogenic E. coli over their ancestor phages Saez,D., Loose,M., Mutti,M., Visram,Z., Hitzenhammer,E., Dippel,D., Tisakova,L., Schertler,S., Wittmann,J., Corsini,L. and Wagenlehner,F. 2020-05-19 — GenBank