Protein

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Genbank accession
YP_009621128.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,55
Protein sequence
MADNIEIEQRVLDGDLIGPVNAEIDTKDFTGLVALENSLLDGTGSEISIELSESLGVIGLDDLVEVKSEIDKSVLKAESTVTEAQRQIDKANATIADLNAISTQITTLVGEAKQAAATATNEAADAGRSETAAAGSAKAASDSQKAAATSQAQALASQKAAATSQAQALASQKAAKTSETNASGHEARTLQSEKNAAASAKAADTDQKAALAAQKAAELARDAAKASENTASTHAGSAFSYKTDAETALASAKKSEAAAAQSAKEAETSASSMTQSVADARTARDAAISARDRSESARDISVNKASIATTKAAEASSSASSASSSASAAKTSETNALNSQRAAKTSETNSKTSETNSKASERVALASKDAAAKSATAASASAADAKKSQDAAKASRDEAEHFAEELRKGSVYRGIWNPNSNKYPDVPPTNSRWDVQLNKGQLEKIFDGKEWNWGDRLIYVLETKSFDIIDSGTGVTSINGETGSVTINRDTLGALGKTEKAADSAKLEGSTKAQIIAKAREGLAPADASYNKAESDSKYLPKNTNIDLNVNDNAHIGVNAGTNKDATFYLTEDSGKHGAYIRYNGSAGNNRTYLGTRSSNAETAFAYVERGSKDLHVVGNVTLDTEQSSVGNSLTRRDWVQSELDKKASTTKATIGKVKMQLGTTIGGANVDNAPLLLKIDWV
Physico‐chemical
properties
protein length:683 AA
molecular weight: 70841,55580 Da
isoelectric point:5,35829
aromaticity:0,03514
hydropathy:-0,52577

Domains

Domains [InterPro]
Coil
Unmapped
74–101
Coil DC_0401
YP_009621128.1
1 683
Architecture
STR
STR 271-675 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009621128.1
1 683
Domain Start End Length (AA) Confidence
N-terminal 1 227 227 0,9901
Central domain 228 532 306 0,3440
C-terminal 533 683 150 0,8277
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-227
Central
228-532
C-terminal
533-683

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Ceto
[NCBI] 		2570300 Uroviricota > Caudoviricetes > Demerecviridae > Cetovirus > Cetovirus ceto
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009621128.1 [NCBI]
Genbank nucleotide accession
NC_042094 [NCBI]
CDS location
range 31993 -> 34044
strand +
CDS
ATGGCAGATAATATTGAAATTGAACAAAGAGTGTTAGACGGGGACTTAATTGGCCCTGTCAATGCCGAAATAGACACTAAAGATTTCACTGGTCTAGTAGCTCTAGAGAATAGTCTACTAGATGGTACTGGCTCTGAAATCTCAATAGAGCTATCAGAAAGTCTTGGTGTTATTGGTCTTGATGACTTAGTAGAGGTTAAGAGCGAAATAGACAAGTCTGTGCTAAAAGCTGAATCAACAGTGACCGAGGCGCAGAGACAGATTGATAAGGCCAATGCTACAATTGCTGATCTTAATGCTATCAGTACGCAAATAACTACACTGGTTGGTGAGGCTAAACAGGCGGCTGCTACGGCTACTAATGAAGCTGCGGATGCAGGGAGAAGCGAGACTGCCGCGGCAGGTAGTGCTAAGGCCGCCTCTGATTCTCAAAAAGCAGCAGCTACAAGTCAAGCTCAAGCTCTAGCTTCTCAAAAAGCAGCAGCTACAAGTCAAGCACAAGCTCTAGCTTCTCAAAAAGCCGCTAAGACCTCAGAAACTAATGCTAGTGGTCACGAAGCTAGAACTTTACAGAGTGAGAAAAATGCAGCAGCATCAGCAAAAGCAGCAGATACAGACCAGAAAGCAGCCCTGGCAGCACAAAAAGCAGCAGAGCTCGCAAGAGATGCAGCTAAGGCTAGTGAAAATACAGCTAGTACACACGCAGGTAGTGCATTTAGTTATAAGACTGATGCCGAGACTGCTTTAGCATCAGCTAAAAAATCAGAAGCAGCTGCGGCACAATCAGCTAAAGAAGCGGAAACGTCAGCATCCTCTATGACTCAATCTGTAGCAGATGCTCGTACAGCCAGAGATGCTGCTATATCTGCTAGAGACCGCTCAGAGTCTGCTAGAGATATTTCAGTTAATAAGGCCAGTATCGCTACGACAAAAGCAGCTGAGGCTTCTTCTAGTGCATCGAGCGCTTCTTCTAGTGCATCAGCAGCAAAAACTAGCGAAACAAATGCTCTAAACAGCCAACGTGCAGCTAAGACTTCCGAGACAAATTCAAAAACCTCCGAGACTAATTCAAAAGCTTCTGAAAGAGTTGCTTTGGCCTCAAAAGATGCCGCAGCTAAGAGTGCAACAGCAGCTAGTGCCAGTGCAGCAGATGCTAAGAAGTCTCAAGATGCCGCTAAAGCCTCACGTGACGAGGCAGAACATTTTGCAGAAGAGCTACGCAAAGGCAGTGTATATAGAGGTATTTGGAACCCAAACTCTAATAAGTACCCAGATGTTCCACCAACTAACTCTCGTTGGGACGTGCAGCTTAACAAGGGACAACTAGAGAAAATATTTGATGGTAAAGAATGGAACTGGGGTGACAGACTAATATATGTATTAGAAACCAAATCCTTCGATATAATCGACTCTGGTACAGGAGTTACTAGTATTAATGGTGAAACTGGATCTGTTACTATTAATAGAGATACTCTAGGTGCTCTAGGTAAAACTGAAAAGGCAGCAGATAGTGCAAAACTAGAAGGTAGCACTAAAGCTCAAATTATCGCTAAAGCTCGTGAAGGCTTGGCTCCAGCCGACGCTAGCTATAATAAAGCTGAGTCTGATAGCAAATACTTACCTAAAAATACTAACATTGACTTAAATGTTAATGATAACGCCCATATTGGTGTAAATGCGGGTACAAATAAAGATGCTACTTTCTACTTAACTGAAGATAGTGGTAAGCATGGTGCTTACATTCGTTATAACGGCAGCGCAGGCAATAATCGCACATACCTAGGTACTCGTAGTAGTAATGCTGAAACTGCTTTTGCATACGTTGAGAGAGGATCTAAAGACTTACACGTAGTAGGGAACGTAACCCTAGATACTGAACAGTCTAGCGTAGGTAACTCACTTACTAGACGAGACTGGGTTCAAAGTGAGCTAGATAAAAAAGCAAGCACAACTAAAGCCACTATTGGTAAAGTAAAGATGCAGCTAGGTACTACAATTGGTGGTGCTAATGTAGATAATGCCCCCTTATTATTGAAGATAGATTGGGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4f0e679c5d1552c725ecb5b3ab7419e6d1df9d348e8e506191236d8068568d0b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6343
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50