Protein

View in Explore
Genbank accession
XYM49789.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAEFYFADRRMEIQAVGSTDETDAILVMEDDLQETLKTASGIYTITISTLSEKYKPADIQEYTKILNYILVKRPDSNKCDYYTIMDIEEDYENFTRSLTVENAGLDLLNEVLPPWGLPADQHNIVWYMEKAIYDSGFVIGINEYGSDKRRKLQWDGSSTALERAQSIATQFDNCELGFSFEVKGLQVTKKYLDIYKHRGSQERKQLFFGREIKNIKKTESAYDLATALQATGGTPEGKEKPINLYSYVGSSDNGRYYTEKNSYYVKDRDALQIYSRYIAPNETGKDVGHIVAQYSYETTSQSELFNRTVAELKKRNHPTEGWEVELYYMPDGLSVGDEVAILHPERDLYLEARVEEITYSITGLPTVKFGDFLQVDSGIDEDLRKMADAIANIEKTQIYYRIVFVSTNGFNFMNGEGYSDVTALVFKGNEDVTEAFEPERFVWQKYDDQGVHDTEWEAQHNGTGNTIRIYGNDPANYSVDITKEE
Physico‐chemical
properties
protein length:485 AA
molecular weight: 55568,01980 Da
isoelectric point:4,66162
aromaticity:0,11959
hydropathy:-0,60351

Domains

Domains [InterPro]
DC_0266
STR
1–485
DC_0266
IPR007119
Unmapped
42–361
IPR007119
IPR010572
ENZ
131–359
IPR010572
XYM49789.1
1 485
Architecture
STR
STR 1-485
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage fHoEfm07
[NCBI] 		3412443 No lineage information
Host Enterococcus faecium
[NCBI] 		1352 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM49789.1 [NCBI]
Genbank nucleotide accession
PV296021.1 [NCBI]
CDS location
range 19898 -> 21355
strand +
CDS
ATGGCAGAATTTTATTTTGCGGATAGACGTATGGAAATTCAAGCCGTTGGATCGACTGATGAAACAGATGCGATTTTGGTCATGGAAGATGATCTACAAGAAACATTGAAAACGGCATCCGGCATCTATACAATCACGATTTCCACGCTATCCGAGAAGTACAAACCGGCAGATATACAGGAATACACGAAAATTTTGAATTATATTCTTGTAAAACGTCCGGATTCGAATAAGTGTGATTATTATACGATCATGGATATTGAAGAAGACTATGAGAATTTCACAAGATCGCTGACAGTTGAAAACGCCGGGCTTGATCTATTGAATGAAGTTTTGCCACCGTGGGGATTGCCGGCCGATCAACACAACATTGTTTGGTATATGGAAAAAGCTATATACGATTCCGGGTTCGTGATCGGTATAAATGAATATGGAAGCGACAAACGAAGAAAATTGCAATGGGATGGATCAAGTACGGCGCTAGAAAGAGCGCAATCGATTGCCACACAGTTTGACAATTGCGAATTAGGCTTTTCTTTCGAGGTAAAAGGCTTGCAGGTAACAAAAAAATATTTGGATATTTACAAGCATCGAGGATCGCAGGAAAGAAAGCAGTTGTTTTTCGGTCGTGAGATTAAAAACATCAAAAAGACTGAAAGTGCCTATGATCTTGCAACGGCTTTGCAAGCAACAGGCGGAACGCCAGAAGGCAAAGAAAAGCCAATCAATCTATATAGTTATGTGGGATCAAGTGACAACGGCCGATATTACACCGAAAAAAATTCATACTACGTGAAAGATCGGGATGCTTTGCAGATTTACAGCCGATACATTGCGCCGAATGAAACCGGGAAAGATGTCGGACACATCGTGGCGCAATACAGCTACGAAACAACGAGCCAATCAGAGCTATTCAATCGAACCGTTGCCGAGTTGAAAAAAAGAAACCATCCAACAGAAGGATGGGAAGTTGAATTGTATTATATGCCGGATGGCTTATCAGTTGGCGATGAGGTGGCCATATTGCATCCGGAACGTGATTTGTATTTGGAAGCCAGGGTGGAAGAAATAACCTATTCGATAACCGGATTGCCAACCGTTAAATTTGGGGATTTCTTGCAGGTTGATTCCGGGATTGATGAAGACTTGCGAAAAATGGCAGATGCCATCGCTAACATTGAAAAAACACAAATCTATTATAGAATTGTATTTGTATCAACTAATGGATTTAATTTCATGAATGGCGAAGGTTATTCGGATGTTACGGCGCTTGTATTCAAAGGAAATGAAGACGTAACAGAAGCATTCGAACCAGAACGATTCGTGTGGCAAAAGTACGATGATCAAGGCGTACACGATACCGAATGGGAAGCGCAACACAACGGCACAGGCAACACGATTCGCATTTATGGGAATGATCCGGCAAATTATAGCGTAGACATCACGAAGGAGGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a4e3418664b0f62753a33e4fc2fb7387507f5e37d84c8087d48eb7c9b9770eb1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8803
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial Potential of Five Phages in Controlling Enterococcus faecalis and Enterococcus faecium Tuomala,H., Nylund,T., Mustonen,M., Flod,A. and Kiljunen,S. 2019-09-19 — GenBank