Protein

View in Explore
Genbank accession
XMR01732.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSSQRIIGNASILGNLAIAGKNAMRTFNGVSPDSNTGIVDYPIYKRSEVQKILDMMPISRIGEMDYLPLNVNGSYEGATSNSATYRIQPTIIEDDGTGVVIRAGTNGSKNGYYYSFIRDLRNITSFTQDMVISTTTEYKPSILSTGENIIRFIGTNGYELLVSYTSGSNYVFTLTNGTFNEVSHIHAKLAESRFGTDKPLYAHVVGSNIFVWCKDTTVANGGLAYSLYTVSRSNIVDGTMTSFAKVTGFSGQTVRNTNYSASNNIRVFDRYWSTTTGTDSLYDIVSPVNSVEYIDYNDYNIQANASTDNSKIRVTLYITPRFKTPLAISTVQPTGISFVYNISSKVMTLDGSARAPATATYTNNNFVVTNPFSISMSNFTGSTNSSSSLGDCGSICQTSDGLVFTSKSRWISDETYGLQLYKVQGTPYDSWVASTRKSSDLTNVNVKPTYGSAVGENLLGVRFIDKRKVLLACSSTSDGVTYGYDSTVSSDIGDSPVYTYNSVVTGSTIEGFAPEAGREYHGNSYDYTAMVSLIAADGTVKTYGSSFIEGVTKDANGLLDPNTMTFSGKYTMSNTALMNLKQAIIDSADITDTSTSRICFYYVPDNTFSRSMAVVCTYNPTNNQGYAIFAEVNAVLSGSEITSASVYTTRYEVLGSISGIQSNALMKRCTGLTVAKYSGFNYLGIDTIHQFTVPGDVSQKMMIAKVKNGDISTNRYFTTYHVSNGSAFQSGAIPGGGFGYYNFSNSDLQTKAVLSVFGTTEAQMDGLIAGTGAVLNNYVIVSQDVAAGFNVYFTREVPVFLAGMFDRLVVQTLDLTTIKSNPANSTFYIYIEMNRSTGKASYVVSTTLLDETLTRAFIGTIITGATNISSIETEKVTRFLTYRPSTTKRGSAIPSSTGVPSGTGTRWK
Physico‐chemical
properties
protein length:908 AA
molecular weight: 98322,70680 Da
isoelectric point:6,37508
aromaticity:0,10793
hydropathy:-0,12930

Domains

Domains [InterPro]
DC_0236
STR
1–908
DC_0236
XMR01732.1
1 908
Architecture
STR
STR 1-908
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XMR01732.1
1 908
Domain Start End Length (AA) Confidence
N-terminal 1 57 57 0,7438
Central domain 58 384 328 0,8564
C-terminal 385 908 523 0,4473
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-57
Central
58-384
C-terminal
385-908

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Turkey5
[NCBI] 		3375711 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XMR01732.1 [NCBI]
Genbank nucleotide accession
PQ471516 [NCBI]
CDS location
range 96214 -> 98940
strand +
CDS
ATGTCATCACAAAGAATTATTGGTAACGCCAGTATATTAGGCAACTTGGCAATTGCTGGAAAAAATGCAATGCGTACTTTTAATGGAGTCTCACCAGACTCCAATACTGGTATCGTCGATTACCCAATATACAAACGTTCTGAAGTTCAGAAAATTCTTGATATGATGCCTATTTCGCGTATAGGGGAGATGGACTATCTCCCTTTGAACGTAAATGGTTCATATGAAGGTGCAACTTCAAACTCAGCTACATATCGTATTCAGCCAACTATCATTGAAGATGATGGTACTGGTGTAGTAATACGTGCAGGTACAAACGGAAGTAAAAATGGTTACTATTACTCTTTTATACGAGATTTAAGAAACATTACTTCTTTTACTCAGGATATGGTTATATCAACTACAACTGAATATAAACCATCTATTCTAAGTACTGGTGAAAATATTATTCGTTTCATCGGCACAAATGGTTATGAACTTTTAGTTTCATATACCTCCGGCTCTAATTATGTTTTCACATTAACAAACGGTACATTCAACGAAGTATCACATATTCATGCTAAGTTAGCTGAATCAAGATTCGGTACTGACAAACCATTATATGCTCACGTGGTTGGTTCAAATATTTTTGTTTGGTGTAAAGACACCACGGTAGCAAACGGTGGATTAGCATATTCATTGTATACAGTTTCCAGAAGTAATATAGTTGATGGTACTATGACTTCTTTTGCTAAAGTGACTGGTTTTTCCGGTCAAACAGTAAGGAATACAAACTATAGTGCATCAAATAATATTAGAGTTTTTGACCGTTACTGGTCTACAACTACTGGTACTGATTCACTATATGATATTGTTAGTCCAGTGAACAGCGTTGAATATATTGATTATAATGATTATAATATCCAAGCAAATGCCAGTACTGACAACTCTAAAATACGAGTTACTTTATACATAACTCCACGTTTCAAGACTCCATTAGCAATTTCAACTGTTCAGCCAACTGGTATTAGTTTTGTTTATAATATTAGTTCAAAGGTTATGACATTAGATGGGTCAGCAAGAGCACCAGCAACAGCAACATACACTAATAATAATTTTGTTGTTACCAACCCATTCTCAATTTCAATGAGTAACTTTACTGGTTCAACTAATAGTTCATCTTCATTAGGTGACTGCGGTTCAATCTGTCAAACATCAGATGGTCTTGTTTTTACATCAAAATCAAGATGGATATCAGATGAAACCTATGGTTTACAACTATATAAAGTACAAGGCACTCCATACGATAGTTGGGTCGCTAGTACTCGTAAGTCCAGTGATTTAACTAACGTAAATGTTAAACCGACATATGGTTCTGCTGTAGGGGAAAACTTACTTGGTGTTAGATTTATTGATAAAAGAAAAGTACTTCTTGCATGTTCCAGTACTAGCGATGGTGTTACTTATGGCTATGACAGTACTGTATCCTCTGATATAGGAGACTCTCCAGTATACACATATAATAGTGTTGTAACTGGGTCTACAATTGAAGGTTTTGCTCCTGAAGCTGGGCGTGAATATCATGGAAATAGTTATGATTATACCGCTATGGTTTCTTTGATTGCGGCTGATGGAACAGTAAAAACATATGGTTCTTCATTTATTGAAGGTGTAACCAAAGATGCAAATGGATTATTAGATCCAAATACTATGACATTCTCTGGAAAATACACAATGAGTAATACTGCATTGATGAATCTTAAACAAGCAATCATCGATAGTGCAGATATCACTGATACCAGTACTTCTAGGATTTGTTTTTATTATGTACCTGATAATACATTCTCAAGATCTATGGCAGTTGTTTGTACATACAATCCAACTAACAACCAAGGTTATGCTATTTTTGCAGAAGTCAATGCTGTTCTAAGTGGTTCAGAAATTACAAGTGCATCAGTATATACAACCAGATATGAAGTGCTTGGGAGTATATCAGGAATCCAAAGTAATGCTCTAATGAAGCGTTGTACTGGATTAACAGTTGCAAAATACTCTGGATTCAATTATCTTGGTATTGATACTATCCATCAGTTCACAGTTCCTGGTGATGTTAGTCAGAAAATGATGATAGCTAAAGTTAAAAATGGTGATATTAGTACTAACCGTTATTTTACAACCTATCATGTTAGCAACGGTTCCGCTTTCCAGAGTGGTGCTATTCCTGGTGGTGGATTCGGTTATTACAACTTCAGTAATTCCGACTTACAGACAAAAGCAGTTCTTTCTGTATTCGGGACGACAGAAGCCCAGATGGATGGTTTGATTGCTGGTACTGGTGCAGTACTGAACAATTATGTTATAGTTTCTCAAGATGTAGCTGCTGGTTTCAACGTGTACTTCACCCGTGAAGTTCCGGTGTTCCTTGCGGGTATGTTCGACCGTCTGGTAGTTCAGACACTTGACTTAACGACCATAAAGAGTAATCCAGCTAACAGTACTTTCTACATTTACATAGAAATGAACCGAAGTACTGGTAAGGCTTCTTATGTTGTGAGTACTACACTCCTTGATGAAACGTTGACACGAGCCTTCATAGGAACTATAATTACTGGTGCTACTAACATATCATCAATTGAAACAGAAAAAGTGACAAGGTTCTTGACCTATCGACCAAGTACAACAAAACGTGGTTCTGCAATCCCGTCCAGTACTGGCGTACCGTCAGGCACTGGTACACGTTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0057004387ac9772958379c6690a427e445e8aa48f805008dba8af33b468ac31
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3801
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Transient expression effect of genes from a Jumbo E. coli phage Petrzik,K. and Brazdova,S. 2023-07-26 — GenBank