Protein

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Genbank accession
YP_008050879.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,76
Protein sequence
MALTVYPLDAGTVGPTGPEGPQGPKGDKGDTGNTGATGATGATGPAGTNGSQMLRGTSAPAAGTGVNGDWYCWEDTRTFLGITNTTFTFYRKESGNWVQVGSTVAGAKWYLNNTSTSSADTKPGDMLLRTDTGDIWQRGATGWGSVVGNLKGPKGDTGDTGPQGPQGLPGDGAVNTVNSVSPDVNGNVQLGPVDIGALALTGGTVTGHTEIRPTTGHAISAYGSSDTSTYFRVTDAGHPYSNSKRATFYNMGVGDTTTDFGGGTFVLGVKNASVVPPTTPTNGVQMWSEGGKLKLRGTDGVVNTVNDFMPKTGGAFTDDFSLEGVSGSYRQFSFDVGGMKRWTFQKDDVAEPGDGSGSNLRISSRNDDGTFKSTVFFADRGTGQVAVGTTVPYSNVKLSTAGAIGLKDIASDPTTATGGSAIYSKSGLLYVKEGDGTVFQLEDSIPLTQRAAANGVATLDSGTKIPIAQLPDQAVTSEFTPEILGLKAWVSPPSSMASGFTYPGVGTGRMSAVYVNRSMSVSKIVWHFFGYAGGLLTGSWAGIYNTSGTLQRATGDMSTASYEPAEQHDTGGGWSSSNLTSAITLSPGIYYILWRMNYTASPVDGPAMGRLENSETTPSRMGISNNIWMHGMYSTSATSAPSTITVANFQRGGTRFWAALA
Physico‐chemical
properties
protein length:661 AA
molecular weight: 68467,77120 Da
isoelectric point:5,38654
aromaticity:0,08926
hydropathy:-0,29864

Domains

Domains [InterPro]
DC_1519
ATT
27–285
DC_1519 DC_1175
YP_008050879.1
1 661
Architecture
ATT
STR
ATT 27-285 | STR 301-661
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008050879.1
1 661
Domain Start End Length (AA) Confidence
N-terminal 1 245 245 0,7712
Central domain 246 444 200 0,2410
C-terminal 445 661 216 0,9341
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-245
Central
246-444
C-terminal
445-661

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Lika
[NCBI] 		1327758 Uroviricota > Caudoviricetes > Arquatrovirinae > Likavirus lika >
Host Streptomyces lividans
[NCBI] 		1916 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008050879.1 [NCBI]
Genbank nucleotide accession
NC_021298 [NCBI]
CDS location
range 17372 -> 19357
strand +
CDS
GTGGCACTGACTGTCTACCCCCTTGACGCGGGGACTGTTGGCCCGACTGGGCCTGAAGGCCCGCAGGGTCCGAAGGGCGACAAGGGCGACACGGGTAACACTGGAGCCACCGGCGCTACCGGCGCGACGGGTCCGGCTGGTACCAACGGCTCGCAGATGCTTCGAGGTACCTCGGCCCCGGCTGCGGGCACGGGCGTCAACGGTGACTGGTACTGCTGGGAGGACACCCGCACCTTCCTCGGCATCACGAACACGACGTTCACCTTCTACCGCAAGGAGTCCGGCAACTGGGTCCAGGTCGGTAGCACGGTCGCTGGCGCGAAGTGGTACCTCAACAACACCTCGACCTCCAGCGCCGACACCAAGCCCGGCGACATGCTGCTCCGTACCGACACGGGCGACATCTGGCAGCGCGGAGCTACCGGCTGGGGCTCCGTCGTCGGCAACCTGAAGGGGCCGAAGGGCGACACGGGCGACACTGGCCCGCAGGGTCCGCAGGGCCTGCCCGGCGATGGCGCGGTCAACACCGTGAACAGCGTCTCCCCGGACGTGAACGGTAACGTCCAGCTCGGCCCGGTCGACATCGGCGCTCTCGCGCTGACTGGTGGAACCGTCACCGGACACACCGAGATCCGGCCGACGACCGGCCACGCCATCTCGGCGTACGGCAGCTCGGACACGTCGACCTACTTCCGGGTCACGGACGCTGGCCATCCGTACTCCAACTCCAAGCGGGCCACGTTCTACAACATGGGCGTCGGCGACACGACCACCGACTTCGGTGGCGGCACGTTCGTCCTCGGTGTCAAGAACGCCTCGGTGGTTCCGCCGACCACGCCGACGAACGGCGTGCAGATGTGGTCCGAGGGCGGCAAGCTGAAGTTGCGCGGCACGGATGGCGTCGTCAACACCGTCAACGACTTCATGCCGAAGACGGGCGGTGCCTTCACCGACGACTTCAGTCTCGAAGGCGTGTCGGGCTCGTACCGGCAGTTCAGCTTCGACGTGGGCGGCATGAAGCGCTGGACCTTCCAGAAGGACGACGTGGCGGAGCCGGGTGACGGCTCGGGCTCGAATCTCCGGATCTCCTCGCGCAACGACGACGGCACCTTCAAGTCGACCGTGTTCTTCGCCGACCGAGGCACGGGTCAGGTTGCAGTCGGCACCACGGTCCCGTACTCGAACGTGAAGCTCTCGACCGCTGGTGCCATCGGTCTGAAGGACATCGCCTCCGACCCGACCACGGCGACTGGCGGATCGGCCATCTACTCGAAGTCCGGCCTGCTCTACGTCAAGGAGGGCGACGGCACCGTCTTCCAGCTCGAAGACTCCATCCCCCTGACGCAGCGCGCTGCGGCCAACGGTGTTGCGACGCTCGACTCGGGCACGAAGATCCCGATCGCTCAGCTCCCCGACCAGGCCGTCACCTCCGAGTTCACTCCGGAGATCCTGGGCCTGAAGGCGTGGGTCTCTCCGCCGTCCAGCATGGCCTCGGGCTTCACCTACCCCGGTGTCGGCACCGGTCGCATGTCCGCCGTTTACGTCAACCGGAGCATGTCCGTCTCGAAGATCGTCTGGCACTTCTTCGGCTACGCGGGCGGTCTGCTGACCGGCTCCTGGGCTGGCATCTACAACACGTCGGGCACGCTCCAGCGCGCGACCGGCGACATGTCGACAGCCTCCTACGAGCCTGCGGAGCAGCACGACACGGGTGGCGGATGGTCGTCCTCGAACCTCACCTCGGCCATCACGCTGAGCCCCGGCATCTACTACATCCTGTGGCGGATGAACTACACCGCTTCCCCGGTGGACGGCCCGGCCATGGGGCGTCTGGAGAACTCCGAGACGACCCCGAGCCGGATGGGCATCAGCAACAACATCTGGATGCACGGCATGTACTCGACCTCTGCGACCTCTGCCCCGTCGACCATCACGGTCGCCAACTTCCAGCGCGGCGGCACCCGATTCTGGGCGGCGCTGGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
783f8b8b36894715cd5e2dec0a694d3c834daa8bae7264b14783199ec4a14cc2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7379
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50