Protein

Genbank accession
YP_006218724.1 [GenBank]
Protein name
pyocin knob domain-containing protein
RBP type
TSP
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MNDVLRLAKAVRKINTIFSTFKDSIYTKNEADNKFINQELMENGLYVIKNKNIENMNDAIQPGVYSISATGVENKPLPNSGSLFVNKDPGGIRQFFQTERTIFIRQFGGIPPSWTDWKELGLKGPKGDTGPIGPQGPKGDTPDISNLVTKTQYTNDLNKKIDKTAFNAIGQHISFNGITIHIQKSNTVVTCNVEGIFKKGKANGWHEVSTRAETSYRPVNMIIKVPLTINIGNTIQINKYAALQIETSGRIMIRVYGLQNDDVEFGGSATWIR
Physico‐chemical
properties
protein length:273 AA
molecular weight: 30352,21810 Da
isoelectric point:9,42059
aromaticity:0,08425
hydropathy:-0,42418

Domains

Domains [InterPro]
cd19958
54–120
cd19958
YP_006218724.1
1 273
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage EF62phi
[NCBI] 		977801 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus faecalis 62
[NCBI] 		936153 Bacteria > Firmicutes > Bacilli > Lactobacillales > Enterococcaceae > Enterococcus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006218724.1 [NCBI]
Genbank nucleotide accession
NC_017732 [NCBI]
CDS location
range 14917 -> 15738
strand +
CDS
GTGAACGATGTGTTGAGGTTAGCAAAAGCAGTAAGAAAAATAAATACAATTTTTTCTACGTTTAAAGATAGTATTTATACCAAAAATGAAGCAGACAATAAATTCATAAACCAAGAGTTGATGGAAAATGGATTGTATGTAATTAAAAATAAAAATATTGAAAATATGAATGATGCTATTCAACCAGGTGTTTATTCAATTTCAGCTACAGGAGTTGAAAATAAACCTTTACCTAACTCGGGTTCTCTATTTGTCAATAAAGATCCAGGAGGAATCAGACAGTTCTTTCAGACGGAGAGAACAATTTTTATTCGACAATTCGGGGGAATTCCTCCGTCCTGGACGGATTGGAAAGAATTAGGCTTAAAAGGTCCAAAAGGTGATACTGGTCCGATTGGTCCACAGGGACCAAAGGGAGATACACCTGATATAAGCAATTTAGTAACAAAAACACAGTATACAAATGATTTGAATAAAAAGATTGATAAAACAGCATTTAATGCTATAGGGCAACATATTTCTTTTAACGGAATCACTATACACATTCAAAAATCGAATACAGTTGTTACATGTAATGTCGAAGGAATATTTAAAAAAGGGAAAGCCAACGGATGGCATGAGGTGTCGACAAGAGCAGAAACAAGTTATAGACCAGTTAACATGATTATTAAAGTACCTTTAACAATAAATATAGGGAATACCATTCAAATAAATAAGTATGCAGCATTACAAATAGAAACATCTGGTCGAATCATGATTCGAGTTTATGGACTTCAAAATGACGATGTAGAGTTTGGAGGGAGTGCAACATGGATAAGATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
297ff082e3b64c5a6afac456b5c4e7bec1264af955247b2e34b71c9856ef90d4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8673
Evidence 0,8673
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of the commensal Enterococcus faecalis 62 isolated from a healthy Norwegian infant Brede,D.A., Snipen,L.G., Ussery,D.W., Nederbragt,A.J. and Nes,I.F. — — GenBank