Protein

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Genbank accession
WNO29126.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,52
TF
Evidence RBPdetect2
Probability 0,58
Protein sequence
MSDLLKQHFRATNGLDAGGNKVINVALADRNVKTDGVSVEYVIQENTIQKYDPTRGYLTDFAVTYGRRIWIANKDIPKPAGDFNQANWTSLRVDPNWIYTVRKGEFEIQSGQFINVDSNAAGNATLLLPLAPDEGDTIVVRDIGGRPGYNGILIKAQDTGASIVFGESRLREVRLTRPYSQIMLTFSNGAWRASLTDFGDTAKMVVPNGIVPTQVQAGDNVVRRYTSNSEIFITLPLFANSNDIINFTDLDGTSPINHMTVRTFDPTISIGTPGQTEVQVRTSGNGFLVYDSIDKIWRIFENDLRTRVRIITSDVTLMPNEHISVFGADNSTVKTINVTLPTDVAVGDTVTIAMNYMRKGQTVVIKASDGDTIASNLNLLQFPKRSEYPPDAAWVQSSSITFNGTTSYVPVLGLAYIEDKASGKSYWIVTESDPTVERVDAKDNTTRARLGVIALATQAQANAESNPEKELAITPETLNGRRSTETQTGIARIATSSEVNQSTTASYLDNVIVTPKKLNERSATETRRGLAEIATNAKMDAGTDDFTIVTPKKLLYRTTSDSRLGVIQLVKTGGAPNTTNDRSSAGTGIFDHSDYKNAVTPKTLREYKATVNQSGIVWLATDSEVRNGTPASSNIPTVVTPEALHKKVATDGAIGLIQIATQTEVNAGGVTNKAVTPKTLNDRTATNDRTGIARFATPGAQGEFEAGTSSTVMVNPKLLFDKFANTDRIQVNTSSGLTITGNLWDHYTINIQEASTSQRGTTTLATAAEVRTGTDAKKIVTAATLHAKTATEGAIGLAQYATQAQVDAGTLSDRIVPPAYLKQTIQVTESWQATDSVRGTVRLSTGDGTWKGNDTNGSTLPDNGYASKGVAVSPYELNLTLKHYLPRLGKAYDAGMLGGQTPDKYARRDIAQTISGAWTFSQDTAFSNNISVQNIIYANGGEVKISPTADTGNVHVRFQNRDGSERGIIYAEPQTASAGNLKVRVKNGTGTTAASQTYTFGGNGTLEVPNEVSTKTLRSSGNAIVGGTVMVKDVQMLAVEGLNSIFGAQSQSAFIRSRDADTQIFAQDSTGSYPILTTKNYARLADGRYVKKAGDTMTGNLNLSGSAIVITGSESWYVPTNETVMRQGSWTAEIKDATKLKGLRGYMVPIRTPIDPANPSTLVVTGYEEKTAAGGVLTQVGVTTNNTYQLWTPYPPTTETADKRFAHTVWMRIYNPNLNKFDDWMRVFTSATPPTAADIGAPSSVSTQVKTLEVLEWIKLGPVKIWPDRPNQTLKFEWVGD
Physico‐chemical
properties
protein length:1281 AA
molecular weight: 138450,26750 Da
isoelectric point:6,85765
aromaticity:0,07182
hydropathy:-0,33607

Domains

Domains [InterPro]
DC_1986
ATT
8–137
DC_1986 DC_1209
IPR048391
ATT
1127–1228
IPR048391
WNO29126.1
1 1281
Architecture
ATT
STR
ATT
STR
ATT 8-137 | STR 348-1126 | ATT 1127-1228 | STR 1229-1270 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNO29126.1
1 1281
Domain Start End Length (AA) Confidence
N-terminal 1 844 844 0,8689
Central domain 845 1043 200 0,2396
C-terminal 1044 1281 237 0,6547
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-844
Central
845-1043
C-terminal
1044-1281

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM-JEC
[NCBI] 		3075854 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO29126.1 [NCBI]
Genbank nucleotide accession
OR359401 [NCBI]
CDS location
range 139327 -> 143172
strand +
CDS
ATGAGCGATTTACTGAAACAACATTTCCGTGCAACAAACGGCTTGGACGCAGGCGGAAATAAAGTTATAAATGTGGCACTAGCTGACCGCAACGTTAAAACCGACGGCGTCTCCGTCGAGTACGTTATTCAAGAAAACACTATCCAAAAATATGACCCGACGCGTGGGTATCTCACTGATTTTGCTGTGACTTATGGACGTCGTATCTGGATTGCAAATAAAGATATTCCAAAGCCTGCTGGAGATTTTAACCAGGCGAATTGGACTTCTTTACGTGTTGACCCGAACTGGATTTATACCGTCCGTAAAGGAGAGTTTGAAATTCAATCTGGTCAGTTCATCAACGTTGACTCTAACGCTGCCGGTAATGCTACATTACTGCTTCCGTTAGCACCAGATGAAGGCGATACTATCGTAGTTCGTGATATTGGCGGGCGTCCTGGCTATAACGGAATCTTAATTAAAGCACAAGATACTGGTGCGTCTATCGTATTTGGTGAATCGCGTCTGCGTGAGGTAAGACTTACACGTCCGTATTCACAAATTATGCTTACGTTTAGTAATGGTGCATGGCGTGCAAGTTTAACCGATTTTGGCGATACTGCCAAGATGGTAGTTCCGAACGGGATTGTTCCGACGCAAGTTCAGGCAGGTGATAACGTAGTTCGTCGTTATACTTCCAACTCAGAGATTTTTATTACTCTGCCGTTGTTCGCTAATTCAAACGATATCATCAATTTTACTGACCTTGACGGTACATCGCCAATTAACCATATGACTGTGCGTACGTTTGACCCAACTATCTCAATTGGGACTCCTGGACAAACAGAGGTTCAAGTACGTACTTCAGGTAATGGGTTTTTGGTATATGACTCGATTGACAAAATCTGGCGTATTTTTGAAAATGATTTACGCACACGAGTAAGAATAATTACTTCTGATGTTACTTTAATGCCTAATGAGCATATTTCTGTATTTGGCGCAGATAACAGTACCGTTAAAACGATTAACGTTACTTTGCCTACAGACGTAGCTGTTGGGGATACTGTCACAATCGCAATGAATTATATGCGCAAAGGACAGACTGTAGTAATTAAAGCTTCTGATGGTGATACCATTGCAAGTAATTTGAATTTACTACAATTTCCAAAACGTTCAGAGTATCCACCTGATGCAGCATGGGTGCAATCAAGTTCAATTACCTTTAACGGAACTACTTCGTATGTTCCTGTTCTTGGGCTTGCATATATTGAAGATAAAGCATCCGGAAAAAGCTATTGGATTGTAACTGAATCTGACCCTACCGTAGAACGTGTTGATGCTAAAGACAATACTACCAGAGCACGGTTAGGTGTTATTGCTCTTGCTACACAGGCTCAAGCTAATGCGGAGTCAAATCCAGAAAAAGAATTAGCAATTACGCCAGAGACATTAAATGGACGTCGTTCTACTGAAACCCAAACTGGTATAGCAAGAATTGCAACTTCCAGCGAAGTTAATCAGTCAACAACTGCTTCTTACTTGGATAATGTAATCGTTACTCCTAAAAAGCTTAATGAAAGGTCTGCTACTGAAACTCGTAGAGGTTTAGCAGAGATTGCGACTAATGCTAAAATGGACGCAGGAACAGACGATTTTACAATTGTTACTCCTAAGAAGTTGCTTTATCGTACTACATCAGATTCACGATTAGGTGTTATTCAATTAGTAAAAACTGGTGGTGCTCCTAACACAACTAACGATCGTTCTTCTGCTGGCACCGGTATATTCGATCATTCTGATTACAAAAATGCAGTTACTCCAAAAACTCTTCGTGAGTATAAAGCTACTGTAAACCAATCAGGAATAGTCTGGTTAGCAACTGATAGCGAAGTTAGAAACGGAACTCCGGCTTCTTCAAATATTCCTACAGTCGTTACACCAGAAGCTTTGCATAAAAAAGTTGCTACTGACGGAGCGATTGGATTAATCCAAATAGCTACACAGACAGAAGTTAATGCTGGCGGCGTGACTAATAAAGCAGTTACACCTAAAACATTAAATGACCGTACAGCAACTAACGATCGTACTGGTATTGCTCGCTTCGCGACACCTGGTGCCCAGGGTGAATTTGAAGCTGGTACTTCAAGTACAGTAATGGTAAACCCTAAATTACTGTTCGATAAATTTGCTAATACTGATCGTATCCAAGTTAATACTAGTTCTGGCTTAACTATTACTGGGAACCTCTGGGACCATTATACCATCAACATACAGGAAGCAAGTACTTCTCAAAGAGGTACAACCACTCTTGCCACTGCTGCTGAGGTTAGAACTGGAACCGACGCCAAGAAAATAGTTACTGCTGCCACGCTACATGCTAAAACAGCAACTGAAGGAGCTATCGGTCTTGCTCAGTATGCTACACAGGCACAAGTTGATGCAGGCACATTAAGTGATAGAATTGTTCCTCCTGCTTACTTGAAACAGACTATTCAGGTAACAGAGTCATGGCAAGCTACAGACAGCGTTAGAGGGACCGTGAGGCTATCTACAGGCGATGGAACGTGGAAAGGTAATGATACCAATGGCTCAACTCTTCCGGATAACGGGTATGCCTCTAAGGGCGTCGCAGTGTCTCCGTATGAATTGAACCTTACACTGAAACATTACTTGCCTCGTCTCGGTAAAGCCTATGACGCAGGAATGTTAGGTGGTCAAACCCCAGACAAATATGCTCGTCGCGATATAGCGCAGACTATTTCTGGAGCTTGGACATTTAGTCAGGATACTGCATTTAGCAATAATATTTCTGTCCAGAATATTATATATGCTAATGGTGGTGAAGTTAAAATTTCTCCAACAGCTGATACTGGAAATGTGCATGTTCGTTTTCAAAATAGAGACGGAAGCGAGCGTGGTATAATTTATGCTGAGCCTCAAACAGCTTCAGCCGGAAACTTAAAAGTTCGCGTAAAAAACGGAACAGGAACTACTGCTGCAAGCCAGACCTACACATTTGGCGGTAACGGTACGTTAGAAGTTCCTAACGAAGTGTCAACTAAAACTCTGAGGTCTTCTGGAAATGCAATAGTTGGCGGAACTGTTATGGTTAAGGACGTTCAGATGCTTGCTGTCGAGGGATTGAATTCAATATTCGGTGCCCAATCACAGTCCGCATTTATTCGTTCCCGTGACGCTGATACACAAATTTTTGCACAGGATTCAACTGGATCGTATCCAATTTTAACTACCAAAAACTACGCAAGATTAGCTGATGGCCGTTATGTCAAGAAAGCTGGCGATACCATGACCGGTAATCTTAACTTAAGTGGTTCTGCTATCGTCATTACAGGTTCTGAATCATGGTATGTTCCAACAAATGAAACTGTAATGAGACAAGGTTCTTGGACTGCTGAAATTAAAGACGCTACTAAACTAAAAGGTCTTCGCGGTTATATGGTTCCAATCAGAACACCGATTGACCCTGCTAACCCAAGCACTTTAGTAGTGACTGGGTATGAAGAAAAAACTGCAGCTGGTGGTGTTTTAACTCAGGTTGGTGTAACTACAAACAATACTTATCAGCTTTGGACTCCTTATCCTCCGACAACCGAAACTGCTGATAAGCGTTTTGCGCATACTGTGTGGATGAGGATTTATAATCCAAACCTTAATAAGTTTGATGATTGGATGCGAGTATTTACATCTGCTACTCCTCCAACTGCAGCTGATATCGGAGCTCCGAGCTCAGTATCAACTCAGGTTAAAACCCTTGAAGTCCTGGAATGGATTAAGCTTGGCCCAGTTAAAATCTGGCCAGACCGTCCAAACCAAACTCTCAAATTTGAATGGGTAGGTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8f9e02ac1b68a5e56b87e573d8426111b45681fbaea0655050e11ddd77258953
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2762
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Combining droplet microfluidics and magnetoresistive sensors for the rapid and quantitative detection of Klebsiella pneumoniae in urinary tract infections Nogueira,C.L., Sousa,J.C., Afonso,R., Santos,D.R., Rodrigues,P., Albuquerque,L., Faustino,A., Abalde-Cela,S., Freitas,P.P., Cardoso,S. and Carvalho,C.M. 2023 — GenBank