Protein

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Genbank accession
QMP81509.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVSSYHLASFRITMFLHTLQRDTDMALNIIKSNFSSGELDPILSTRGDVAQYHNGAKELTNVIALVEGGVKKRAGTRYIRKGTTSDYVRMLPFAPSASQPFFIILGVGKATIVNATTLAVVTTVTTPYNTVQRVKDVQYINSRYTLFFTHPDFPVQQLRTSADYADWSWTKLIFDIPPLAESGRSPNSTLQPGAKEVGASILLNSSPYSNWSATQQYYIGDRVYYNSSYWEAVSDNLNSPPSGSNPNWVYVPESRPNIFSPSDVGSIIKINGGLVRVTEFTNGWAVRGTVLVKLNSTVQALGRSWTITGGAYNATDGYPRCCTFFKQRLVLGGTRKYPNMVWFSRIGDPQNFLETTKDADAFSVAPASDRSDNILHLVQSRGVVALTGGSEFLIDSNEALTPTTVQITEHTAYGAYPDARPTRVANELLFVQRGGERLRALSYRYEVDGLVSPDISILSAHITRNNGGIAELSYQQEPNSLVWVVLENGKVAGVTLNREQEVIAWALEDFNAEVLSIVSTPTLLGSDKTFALIKRLDGQVWLEQLTQDALTDCEVGYTVSNNTITATHLNGFAASGIENVQAWMMVNGAYTQVKIKSRSGNVLTLQDDDYTGKTVYVGAPIKCRISLLPPEFAQYPSSMRTSKITIHSVYATIYNTLGLRVNGEDVDDIRFDDNPLNPLKPFSRVVNIGQYGWTTVEDLDMVIEHDRPLPFHLQAVNLELTVNNK
Physico‐chemical
properties
protein length:725 AA
molecular weight: 80152,41180 Da
isoelectric point:5,95084
aromaticity:0,09655
hydropathy:-0,18234

Domains

Domains [InterPro]
DC_0058
STR
1–725
DC_0058
G3DSA:2.10.10.20
ATT
194–256
G3DSA:2.10.10.20
IPR036573
STR
204–251
IPR036573
QMP81509.1
1 725
Architecture
STR
ATT
STR
STR 1-193 | ATT 194-256 | STR 257-725
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMP81509.1
1 725
Domain Start End Length (AA) Confidence
N-terminal 1 179 179 0,9219
Central domain 180 378 200 0,2259
C-terminal 379 725 346 0,1042
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-179
Central
180-378
C-terminal
379-725

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_APEC
[NCBI] 		2759186 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli APEC O78
[NCBI] 		1274814 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMP81509.1 [NCBI]
Genbank nucleotide accession
MT664721 [NCBI]
CDS location
range 33651 -> 35828
strand +
CDS
ATGGTCAGCAGCTACCATCTGGCAAGTTTCAGAATAACTATGTTTCTCCATACATTGCAGCGAGATACTGATATGGCACTAAATATAATCAAGTCTAATTTCAGTTCCGGTGAGCTTGACCCGATACTCTCTACTCGCGGCGATGTGGCGCAATATCATAACGGTGCAAAAGAGCTGACCAACGTCATTGCACTGGTAGAAGGTGGAGTTAAGAAACGTGCAGGAACTCGCTATATTCGCAAAGGAACAACATCTGACTATGTTCGGATGCTGCCATTTGCGCCTAGTGCTTCACAGCCGTTCTTTATCATCTTAGGGGTAGGTAAGGCAACCATTGTTAATGCAACCACTCTAGCAGTCGTAACCACAGTGACCACGCCATACAACACAGTGCAACGCGTTAAAGATGTTCAGTACATTAACTCGCGTTACACCTTGTTCTTCACCCACCCTGATTTTCCAGTTCAGCAACTTCGGACAAGTGCAGATTATGCGGATTGGAGTTGGACAAAATTAATTTTTGATATACCACCATTGGCAGAGAGTGGGCGCTCACCTAACAGTACATTGCAACCAGGTGCAAAAGAGGTTGGGGCGTCAATTCTGCTTAATTCAAGTCCATATTCCAATTGGTCAGCAACACAGCAGTACTACATTGGAGATCGTGTTTATTACAATTCTTCCTATTGGGAAGCTGTAAGTGACAACTTGAACTCACCGCCTTCCGGTTCAAATCCAAATTGGGTGTATGTCCCTGAAAGCCGGCCTAATATTTTTAGTCCATCTGATGTGGGTTCTATTATAAAAATTAACGGTGGTCTGGTAAGAGTCACAGAGTTTACTAATGGTTGGGCTGTGCGTGGAACTGTTCTGGTTAAGCTTAATTCTACGGTTCAGGCGCTCGGCAGATCATGGACAATTACAGGTGGCGCTTATAATGCAACTGATGGTTATCCGCGTTGCTGCACCTTCTTTAAGCAGCGACTTGTGCTGGGTGGTACTAGAAAATATCCAAACATGGTCTGGTTTAGCCGGATTGGTGACCCTCAAAACTTCCTTGAAACCACAAAGGATGCGGATGCATTTAGTGTTGCTCCTGCCTCAGATCGTTCTGATAATATCTTGCACCTAGTTCAGTCAAGAGGTGTTGTGGCTTTAACTGGCGGTTCTGAGTTTCTGATTGATTCAAATGAAGCATTGACCCCGACTACTGTACAGATTACAGAGCATACGGCGTATGGTGCTTATCCAGATGCTCGGCCTACTCGTGTTGCAAATGAATTGTTGTTTGTACAGCGTGGTGGCGAGCGATTAAGAGCATTATCCTATCGTTACGAAGTGGATGGTCTGGTCTCGCCAGACATTAGCATTCTGTCTGCACACATTACCCGAAACAATGGTGGGATTGCTGAGCTGTCCTATCAGCAAGAACCTAATAGTCTGGTATGGGTGGTTTTGGAAAACGGAAAGGTTGCAGGTGTGACATTAAACCGCGAGCAAGAGGTCATTGCTTGGGCATTGGAAGATTTTAATGCTGAGGTGCTCTCTATTGTAAGTACACCCACATTGCTTGGTTCTGATAAAACCTTTGCACTCATCAAACGGCTAGATGGTCAGGTCTGGCTAGAACAGCTTACGCAGGATGCATTAACTGACTGTGAAGTAGGTTATACGGTAAGCAATAACACCATTACAGCGACACATCTAAACGGATTTGCTGCATCAGGTATTGAGAATGTTCAAGCGTGGATGATGGTTAATGGTGCTTATACTCAGGTCAAGATCAAGTCAAGATCAGGCAATGTTCTAACCCTTCAGGATGATGACTACACCGGAAAGACGGTTTATGTTGGTGCGCCAATCAAGTGTAGAATATCGCTACTGCCACCTGAATTTGCTCAATATCCCTCTTCTATGCGTACCTCAAAAATAACGATTCATTCAGTCTATGCGACGATTTATAATACACTTGGCTTACGTGTAAATGGTGAAGATGTGGATGATATACGTTTTGATGATAATCCGCTGAACCCGCTTAAACCGTTTAGCCGTGTGGTCAATATTGGACAGTATGGGTGGACAACGGTTGAAGACTTGGACATGGTAATTGAACATGACAGACCATTGCCATTTCATTTGCAAGCAGTCAATCTCGAATTAACGGTGAATAACAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e8167374ab62b31cd58b05d107576d669f14c77acff617cc5c30b07856cfc1a5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8749
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and Activity Analysis of Broad-Spectrum Endolysin from a Novel Phage Infecting Turkey Pathogenic Escherichia coli APEC O78 Deng,S.S. 2021-05-31 — GenBank