Protein

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Genbank accession
QPI17857.1 [GenBank]
Protein name
baseplate wedge subunit and tail pin
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKQEILIGNVVDDGQGDYLRRGGQKTNSNFSELYTQLGDGSVPHAAGAWKTYSQPILNPEFGQSWALNTTNNTITVNLPKGNANDYNKVIRLRDVWATWATRAVTLIPASGDTLKGSPNPKDLFRDYLDIELVYCSPGRWEYVENKQINKITTSELATVAKQSFIATQGQTDFIDIFGAGDSYNTRSLDVFVRGNLLYFDEAIDDSTDYGSPDPNSSGMIALDGHSIRLKYPCDAGDTVQFVTYLDGIANWRTSYEARTMKVYNTDEISSESVAGEIWVGDLANKHIFTNEELGISNRILVNPLSSEVFLNGRMLTKAGSADLPAFRCEGAEGYDEESCIGNSGVWTATGEDYSMVMVDSIVTGIKFGQALESGDIISLRWYNNDIGTIMDWEGVGGIKEKTDLVYLNNEYFTQRTNRIEYTDYNDPSQKTLRHVPDSAPSRILDVQTMFDVIYPIGSIYENAHNAANPSTYMGFGTWTRYGIARATIGWNPDDTDGDFSLNNNDLDSGGNPTSTSGGTGGNRSVEIQKINVPEIQSTEKVLISDANGAIVVGGCELDPDAQGPGYTKYREDVLKVNQGNTVPDRLGVLPPFVTVHRWIRVA
Physico‐chemical
properties
protein length:602 AA
molecular weight: 66279,59880 Da
isoelectric point:4,55948
aromaticity:0,09635
hydropathy:-0,41877

Domains

Domains [InterPro]
IPR034695
Unmapped
1–602
IPR034695
IPR036240
STR
1–230
IPR036240 IPR054430 IPR053827
DC_2238
STR
1–580
DC_2238
IPR008987
ATT
2–152
IPR008987 IPR056391
G3DSA:1.20.5.960
Unmapped
14–41
G3DSA:1.20.5.960
QPI17857.1
1 602
Architecture
ATT
STR
ATT
ATT 1-261 | STR 262-448 | ATT 449-601 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPI17857.1
1 602
Domain Start End Length (AA) Confidence
N-terminal 1 313 313 0,8871
Central domain 314 512 200 0,3735
C-terminal 513 602 89 0,9642
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-313
Central
314-512
C-terminal
513-602

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage POP12
[NCBI] 		2741065 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI17857.1 [NCBI]
Genbank nucleotide accession
MT560058 [NCBI]
CDS location
range 45781 -> 47589
strand +
CDS
ATGAAGCAAGAAATTCTTATCGGTAATGTTGTTGACGATGGTCAAGGCGATTATTTGCGTCGAGGTGGTCAAAAGACCAACTCCAACTTTTCCGAATTATATACCCAGCTGGGGGACGGTTCAGTTCCTCATGCTGCTGGTGCATGGAAAACGTATTCACAGCCAATTCTAAACCCTGAATTTGGTCAGTCTTGGGCATTGAATACTACGAATAACACAATCACGGTTAATTTACCTAAAGGCAATGCGAATGATTACAATAAAGTAATTCGTTTGCGTGATGTGTGGGCGACTTGGGCAACAAGAGCAGTAACATTGATTCCTGCTTCTGGTGATACCTTGAAAGGTTCTCCAAACCCTAAAGATTTATTCAGAGACTATCTTGATATTGAATTAGTGTATTGTTCTCCGGGTCGTTGGGAATATGTTGAAAATAAACAAATCAACAAAATTACTACATCTGAATTGGCTACTGTAGCGAAACAATCTTTTATTGCAACGCAAGGCCAAACTGATTTTATTGATATTTTTGGTGCTGGTGATTCGTATAATACAAGAAGTCTTGATGTTTTTGTTCGAGGTAACTTACTTTATTTTGACGAAGCCATTGATGATAGTACAGATTACGGTTCTCCTGATCCTAACTCATCTGGAATGATTGCGCTGGATGGTCATTCAATTCGTTTGAAATATCCGTGCGATGCTGGCGACACCGTTCAGTTTGTGACATATCTTGATGGTATTGCTAACTGGCGTACTTCATACGAAGCCAGAACGATGAAAGTGTATAATACCGACGAAATAAGTTCTGAAAGTGTTGCAGGAGAAATATGGGTCGGCGATCTTGCAAATAAACATATTTTCACCAATGAAGAATTGGGAATTAGCAACCGTATTTTAGTAAATCCACTATCAAGTGAAGTTTTCTTGAACGGTCGCATGTTGACTAAAGCAGGTAGCGCAGATCTTCCGGCTTTTCGATGTGAAGGTGCAGAAGGATATGATGAGGAAAGCTGTATAGGAAACTCAGGCGTTTGGACTGCAACAGGCGAAGATTATAGTATGGTAATGGTCGATTCAATCGTTACTGGTATTAAATTTGGTCAGGCTTTGGAATCCGGTGATATTATTAGTTTGCGTTGGTATAATAATGATATCGGAACAATAATGGATTGGGAAGGTGTGGGTGGAATTAAAGAAAAAACCGATTTGGTTTATCTGAATAATGAATATTTCACCCAAAGAACAAATAGAATTGAATATACAGATTATAACGATCCTTCTCAGAAAACATTACGTCATGTTCCAGATAGTGCTCCAAGTAGAATTCTTGATGTTCAGACAATGTTTGATGTCATTTATCCTATAGGAAGCATATATGAAAATGCACACAACGCAGCAAATCCATCAACTTATATGGGTTTCGGTACATGGACTCGATACGGTATTGCAAGAGCAACAATAGGGTGGAATCCAGACGATACTGACGGTGACTTTTCATTAAACAATAATGATTTGGACAGTGGCGGAAACCCAACAAGTACGTCAGGCGGTACAGGTGGTAATAGATCGGTTGAAATTCAAAAAATCAACGTTCCTGAAATCCAATCTACAGAAAAGGTTCTTATTTCAGACGCAAACGGCGCTATTGTTGTTGGTGGATGTGAATTAGATCCAGACGCACAGGGGCCGGGTTACACTAAATACCGTGAAGATGTCTTAAAAGTAAACCAAGGCAATACAGTTCCAGATAGATTAGGCGTTTTGCCTCCTTTCGTTACTGTTCATCGCTGGATAAGGGTAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ffc68cb97ced3f5b0bcbe3e5da3c478d5c6a233bb4536bbcdc6649fc6606fa3a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6330
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50