Protein

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Genbank accession
XEN39001.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSNNNTYQHVSNESIYVEFDPTGSNFPETVTNVQAALAAISPSGVNGVPEATTTTPGIIQIATPQEVIDGLDNSKAVTPATLNARLQYPNATETQYGLTRYATEDEAVTGAIDDASITPLKLNQKIDNVFQTKVSTEATNGVIKISTSAAALAGSDDTTAMTPLKTQQLAIKLISQIAPNNSDATESITGVVRLATVAQAQQGTLREGYAISPYTFMNSVASETNKGVVKLGTQTEVNSNNSSVVVTGATLNGRGATTSLRGVVRLTTQAGSQSGGDGSSALAWNADVIHQRGGQTINGTLRINNTLTVGSGGANITGNVNMTGGYIQGNRIVTQNELDRILPVGSITMWAADSLPSSDWRFCHGGTVSASECPVYASRIGTRYGGSSSNPGLPDMRGLFVRGSGRGTHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQKQQMSYHKHAGGFGEHDDSGAFGNTRRSNFVGTRKGLDWDNRSYFTNEGYEIDPASQRNSKYTMNRPELIGNETRPWNISLNYIIKVK
Physico‐chemical
properties
protein length:527 AA
molecular weight: 55773,97700 Da
isoelectric point:6,41010
aromaticity:0,06072
hydropathy:-0,40816

Domains

Domains [InterPro]
DC_0176
STR
1–450
DC_0176
SSF69349
STR
247–327
SSF69349 IPR037053 IPR044916
IPR015173
STR
247–327
IPR015173 SSF88874
G3DSA:2.10.280.10
Unmapped
247–287
G3DSA:2.10.280.10 G3DSA:2.160.30.10 IPR011083 IPR027448
XEN39001.1
1 527
Architecture
STR
ATT
STR
STR 1-330 | ATT 331-401 | STR 402-526 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PNJ-9
[NCBI] 		3239045 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEN39001.1 [NCBI]
Genbank nucleotide accession
PQ100635 [NCBI]
CDS location
range 73462 -> 75045
strand -
CDS
ATGAGTAATAACAATACATACCAACACGTTTCAAACGAATCTATTTACGTTGAATTCGACCCTACGGGGTCGAATTTTCCAGAGACAGTCACTAATGTCCAAGCCGCATTAGCTGCTATTTCTCCTTCAGGTGTTAATGGCGTACCGGAAGCAACAACTACTACACCAGGAATTATTCAAATAGCTACTCCACAAGAAGTTATTGATGGATTAGATAATAGTAAAGCTGTTACTCCGGCAACACTGAATGCTCGTCTACAATATCCTAATGCAACCGAAACTCAGTATGGTTTAACTCGTTATGCTACTGAAGATGAAGCAGTAACCGGAGCTATTGACGATGCATCAATTACTCCGCTTAAATTGAATCAAAAAATAGACAATGTATTTCAGACAAAAGTGTCAACAGAAGCAACAAATGGTGTAATTAAAATTTCAACTTCTGCTGCGGCATTAGCTGGTTCTGACGATACAACGGCAATGACCCCGTTAAAAACACAGCAATTAGCAATTAAACTTATTTCGCAAATTGCTCCAAATAATAGTGACGCCACCGAATCTATTACCGGTGTTGTTCGTTTAGCTACAGTTGCACAAGCACAACAAGGCACCCTGCGTGAAGGCTATGCAATTTCACCTTATACCTTTATGAATTCAGTAGCATCAGAAACTAATAAAGGCGTCGTTAAACTAGGGACACAGACTGAAGTAAATAGTAACAACTCTTCAGTTGTAGTGACTGGCGCAACATTAAACGGCCGCGGGGCTACAACTTCTTTACGTGGAGTTGTTCGTTTAACTACACAAGCGGGTAGCCAATCAGGTGGTGATGGTTCTTCTGCCCTTGCTTGGAATGCTGATGTTATCCACCAACGAGGCGGACAAACTATTAATGGCACTCTTCGCATTAATAATACGTTGACGGTTGGTTCCGGTGGCGCTAATATAACTGGTAATGTCAATATGACTGGTGGTTATATTCAAGGCAATCGTATTGTGACTCAAAATGAATTAGACCGAATTCTTCCTGTTGGCTCTATTACAATGTGGGCTGCAGATAGTTTACCGAGTTCTGACTGGCGCTTCTGTCACGGTGGGACCGTTTCTGCTTCAGAATGTCCGGTATATGCTTCCAGAATTGGGACACGATATGGTGGTAGCTCTTCTAACCCGGGCTTGCCTGATATGCGTGGATTATTTGTTCGCGGCTCAGGTCGTGGTACACATTTAACTAACCCTAATGTTAATGGTAATGACCAATTTGGTAAACCTCGTTTAGGAGTTGGTTGTACTGGTGGATATGTCGGTGAAGTGCAAAAACAACAGATGTCATATCATAAACATGCTGGTGGTTTTGGCGAACACGATGATTCCGGTGCATTTGGTAATACTCGTCGTTCAAACTTTGTTGGTACTCGTAAAGGACTTGACTGGGATAACCGTTCATATTTTACTAACGAAGGATATGAAATTGATCCAGCGTCTCAGCGTAACTCTAAATATACCATGAATCGTCCAGAATTAATTGGAAATGAAACTCGTCCATGGAATATTTCTTTAAACTATATTATTAAGGTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
70d6e7d636e8cde23b852b3a3c208d26ff758eb7798fad55acfdaeb0d07dd6ae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7043
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of novel Escherichia coli phage PNJ-9 Fu,K.L., Cui,J.Q. and Tang,F. 2019-10-08 — GenBank