Protein

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UniProt accession
M4SIH3 [UniProt]
Protein name
Fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,86
Protein sequence
MALTRLKNIITSRTGRIIYVNPDDFDASDSIDNRGNSALRPFKTIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVVDNRPGEVLYTNVAPIDANSNLDITSPNNVLYKYNSVEGGLIVPRGCSLVGTDLRRTKIIPKYIPYPTTYAAKGINEGQEPPRTSIFRVTGGTYFWQFSFFDGSEEGVYFKPDSTETIPPKFSHHRLTCFEFADNVNTLADFIAAGRVPSGDYSAVPNILERTDLEIYYQKISKAFSSIPDTSGDPTTDQIQARVEENRIVGPISDEYRVSQITSNGATATAVTVDEFDQPRNHGFSVGVNINIDGVTGSLGPNSAADIALYEGSFTVTSARDNIFTYQMSGEPSGNAVGTAITVKTEIDTVDSASPYAFNLSLRSVWGMNGMHADGSKSTGFKSMVVAQFTGLSLQKDDRAFVLYDQSTGTYTPQAAGSGAHLNGFAEYRKGWAHEHIKCSNDSFIQAVSVFAVGYGTHFTALSGGDMSITNSNSNFGNTALRSAGFKAKAFSKDKSGFVSHIIPPKTLPVVTAVCTGTSGATTVTLPNDGSVYGVLAGMNVTGNGIGTGATVLSTSGNDVTLSVANSATVNNQVIFGDETAVNWVNIDINRTKVINAGLSGQGELAGTRLYLFGYTNENSPPTNKVQGFTVGARLDGTGGSAVPDKLFCQLAATAGADPTPLSARIAGAGPSVSSVTPGAAGSPLQFDSNFYNLDANTGTGTQPGGLDAVGGWYLTVENNNASNEIYQALNTNADFNNVSFTPTTFIKRISDPRDLQDRTYRIRYETDKDKLSPTPRDPISGYVLQPLNSDAGGVNLQGAFYIYDIEKVQPLISGVQNGVYYITLLYASVTPNVANFNDRKFSQNVNEVYPTFDRDNPVADPLRAYSKADTQIIGSVSATNNLLSDGEFVKDPKRSITKEAIVKLLKDTGWPAANAPAYTGGQEDSEGENDGSGSLSTIILTARSGDEEARKINIRTSSGANVPIPVELRRHSIMRSGNHTFEYLGFGPGNYSTAFPQAQVETLTEEQIKFSQSIKEEAGVAFYSGLNSNGDLFIGNQIINPVTGQITSEDIAQLNVVGEENTTIETFSELVLTDKLTVIGGASNQLESIFAGPVTFQGLVSSTQNIQARKLTYTNQDGTTIRQTLMAPPNNPDNGEPNLTGITTYPTQADGDLVYNQSWVPGKSLGWIYYDNGVAGESNWYEFGLSDTGVININDKYGNNVPLTINNAGDAGTGVGIGTEPENTFRLTVSGNTKIDGDVVGTGFGVVGSGKYIRRLYTGDGTTQTFTITNPSNTNIDHTANSILVFINGVMQIGGTASEVSGNTANYSVSNAQVVFGSAPPTGVNIQILELPI
Physico‐chemical
properties
protein length:1365 AA
molecular weight: 145911,65980 Da
isoelectric point:4,78109
aromaticity:0,09084
hydropathy:-0,26271

Domains

Domains [InterPro]
DC_0066
STR
1–1364
DC_0066
M4SIH3
1 1365
Architecture
STR
STR 1-1364 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
M4SIH3
1 1365
Domain Start End Length (AA) Confidence
N-terminal 1 89 89 0,9689
Central domain 90 312 224 0,9214
C-terminal 313 1365 1052 0,1352
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-89
Central
90-312
C-terminal
313-1365

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Syn30
[NCBI] 		536474 Uroviricota > Caudoviricetes > Pantevenvirales > Leucotheavirus > Leucotheavirus syn30
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH56127.1 [NCBI]
Genbank nucleotide accession
HQ634189 [NCBI]
CDS location
range 25499 -> 29596
strand -
CDS
ATGGCTCTTACTAGACTTAAGAACATTATTACTTCCCGCACGGGAAGAATTATCTATGTGAATCCAGATGACTTTGATGCATCTGATTCAATTGATAACAGAGGTAACTCTGCATTGCGACCATTCAAAACTATTCAAAGAGCATTTCTTGAGGTAGCAAGATTCTCGTATCGAGTTGGTCTGAGTAATGACGAATTCGACGCATTCTCTATCATGCTGTATCCAGCAGAGTATGTTGTTGATAACAGACCTGGCGAGGTTCTCTACACAAACGTTGCTCCCATTGATGCTAACTCAAACTTAGATATTACATCACCTAACAATGTATTGTATAAGTACAATTCTGTAGAAGGTGGTCTCATTGTTCCTAGAGGTTGTTCTCTTGTAGGTACTGATCTTCGTCGTACAAAAATTATTCCTAAGTACATTCCTTATCCTACAACTTATGCCGCAAAAGGCATTAATGAGGGTCAGGAACCTCCTAGAACTTCTATTTTCAGAGTAACTGGTGGTACATATTTCTGGCAATTCTCTTTCTTCGATGGTAGTGAAGAAGGTGTATATTTCAAACCAGACTCTACAGAAACAATTCCTCCAAAGTTCTCTCACCATAGACTTACCTGCTTTGAATTTGCAGATAATGTCAATACTTTAGCAGATTTTATTGCTGCTGGAAGAGTTCCCTCTGGTGACTATTCCGCAGTTCCAAATATTCTTGAGAGAACAGACTTGGAGATTTACTATCAAAAGATCTCTAAAGCATTCTCTTCAATTCCTGATACATCTGGTGATCCTACTACTGACCAAATTCAGGCAAGGGTTGAAGAAAACAGAATCGTTGGTCCTATCTCTGACGAATATCGTGTTTCTCAGATTACAAGTAATGGTGCAACTGCAACTGCTGTAACTGTTGACGAATTCGATCAACCTAGAAATCATGGATTCTCTGTTGGTGTTAACATTAACATTGATGGTGTTACTGGATCTTTAGGACCTAATAGTGCAGCAGATATTGCATTGTATGAAGGTTCGTTCACTGTAACATCTGCTAGGGATAATATCTTTACCTATCAGATGTCGGGTGAACCGAGTGGAAATGCTGTAGGTACTGCTATCACAGTTAAAACTGAGATTGATACAGTTGACTCTGCATCACCATATGCGTTTAACCTATCACTGAGATCAGTGTGGGGTATGAATGGTATGCACGCTGATGGTAGTAAATCTACTGGTTTCAAATCAATGGTTGTGGCGCAGTTTACTGGTCTGTCACTACAAAAAGATGATAGGGCATTTGTTTTATACGATCAATCAACTGGAACTTATACACCACAGGCAGCAGGTTCAGGTGCTCACTTGAATGGTTTTGCAGAATATAGAAAGGGATGGGCACACGAACACATTAAGTGTAGTAATGACTCATTCATTCAGGCAGTTTCGGTGTTCGCTGTTGGATATGGCACACACTTTACCGCACTGAGTGGCGGTGACATGTCAATTACGAACTCTAACTCTAACTTTGGTAACACTGCTTTAAGATCTGCTGGTTTTAAGGCAAAAGCATTCTCTAAGGACAAATCTGGATTCGTCTCACATATCATTCCACCCAAAACATTGCCTGTTGTAACAGCAGTATGTACTGGTACTAGTGGTGCTACAACTGTTACTTTACCGAATGATGGTTCGGTGTATGGTGTATTGGCAGGTATGAATGTAACTGGCAATGGTATCGGAACTGGTGCTACTGTATTAAGTACATCTGGTAATGACGTTACATTATCTGTTGCCAATAGTGCAACCGTCAATAATCAAGTTATTTTTGGTGATGAAACTGCGGTAAACTGGGTCAACATTGACATCAACAGAACAAAAGTAATTAACGCAGGATTAAGTGGACAAGGCGAACTCGCAGGAACAAGATTATACTTATTTGGATACACGAACGAAAATTCGCCTCCTACAAATAAAGTCCAAGGTTTCACCGTTGGAGCACGTCTTGATGGCACGGGCGGTAGTGCTGTACCCGACAAATTATTCTGCCAGTTAGCAGCAACTGCTGGTGCTGATCCTACACCATTATCTGCAAGAATTGCTGGTGCTGGTCCCAGTGTTTCAAGTGTTACTCCTGGTGCTGCTGGATCACCATTGCAATTTGACTCTAATTTCTATAACTTAGACGCTAATACTGGAACTGGTACTCAACCTGGTGGTTTAGATGCAGTTGGTGGTTGGTATCTAACTGTAGAAAATAACAATGCTAGTAATGAAATTTATCAAGCACTGAATACTAATGCTGATTTCAATAACGTAAGTTTCACACCTACTACGTTCATTAAGAGAATCTCTGACCCTAGAGACTTGCAGGATAGAACGTATCGTATCCGTTATGAAACTGACAAAGATAAATTAAGTCCTACACCTAGAGATCCTATCAGCGGTTATGTTTTACAACCTCTGAATAGTGATGCAGGTGGTGTAAATCTTCAAGGTGCTTTCTACATCTACGATATTGAAAAAGTACAACCTTTGATTAGTGGAGTACAAAATGGAGTCTATTATATTACCCTCCTTTATGCATCTGTTACACCTAACGTTGCTAATTTCAACGACAGGAAGTTCTCTCAAAACGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTGTTGCTGACCCTCTGCGTGCTTATTCCAAAGCTGACACTCAAATTATCGGGTCGGTAAGTGCAACAAATAACCTACTATCTGATGGTGAATTTGTTAAAGATCCTAAGCGATCTATCACTAAGGAAGCAATCGTTAAACTCCTCAAAGATACTGGTTGGCCAGCAGCAAACGCTCCCGCATATACTGGTGGTCAGGAAGATTCTGAAGGAGAAAATGATGGTAGTGGTAGTCTTTCTACAATCATTCTTACTGCTAGATCTGGTGATGAGGAAGCAAGAAAGATCAACATTCGTACATCCTCTGGAGCAAATGTTCCTATTCCAGTAGAACTCAGACGCCACTCAATTATGCGTTCTGGTAACCATACGTTTGAATATCTTGGTTTCGGTCCTGGTAACTATTCAACTGCATTCCCTCAGGCACAGGTTGAAACTCTGACGGAAGAACAGATTAAATTCTCTCAGTCAATCAAAGAAGAAGCGGGTGTTGCTTTCTATTCTGGTCTGAACTCTAATGGTGATCTGTTTATTGGTAACCAGATCATTAACCCTGTTACTGGTCAGATCACTAGTGAAGATATTGCACAACTTAATGTTGTTGGTGAAGAAAACACAACTATCGAAACATTCTCTGAGTTGGTGCTTACTGATAAACTAACGGTTATCGGTGGTGCATCTAACCAGTTAGAATCTATTTTTGCTGGTCCTGTTACATTCCAAGGACTTGTATCTTCTACACAGAATATTCAGGCAAGAAAACTTACATATACCAACCAAGATGGTACAACCATCAGACAAACACTGATGGCACCTCCAAATAATCCTGACAATGGTGAACCAAACTTAACTGGTATTACAACATATCCAACTCAGGCAGATGGTGACTTAGTTTACAATCAAAGTTGGGTGCCTGGAAAATCATTAGGTTGGATTTATTATGATAATGGTGTTGCTGGCGAAAGTAATTGGTATGAGTTTGGTTTAAGTGATACTGGTGTTATCAACATTAATGATAAGTATGGAAATAATGTACCTCTGACTATCAATAATGCTGGTGATGCTGGCACTGGTGTTGGTATCGGTACTGAACCTGAGAATACTTTCAGACTCACAGTTTCTGGTAACACAAAGATTGATGGCGATGTTGTTGGTACTGGTTTTGGTGTAGTTGGTTCTGGTAAATATATCAGGAGACTATATACAGGTGATGGCACAACTCAGACGTTTACTATCACTAATCCATCAAATACTAATATTGATCACACCGCAAACTCAATACTTGTGTTTATTAATGGTGTTATGCAAATTGGTGGAACTGCATCGGAAGTTAGTGGCAATACGGCAAACTATTCCGTCAGTAATGCTCAGGTGGTATTTGGATCTGCACCTCCAACTGGTGTAAACATCCAAATTTTAGAATTACCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a0981f548ad251b5b486e974a553b3d106cee2120b738e87080c3d31b99d5a07
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3653
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50