Protein

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Genbank accession
NP_932575.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MATQFMAHLGPSYVETSHLSENNAIKYKLEALGSNADSTVKVPFIKLNGASRLSSYSRGITAVTISPTGVASNQATFDLYTRPEHFDTLRSYLMSAPSNNIVVLVSYDAMKSTEAFDEFMYQYGSRSWPGVPYLNKVLPDSRLYRSSYVAIFNTSLKRFCYENFVGNDYTATSDTSAYLEVVFDTVEDIGACGTPERKVDDINEYFSRPDDYAFIRYFPTENITNWEAIYHVKCELYNDQVLKDANGHARLYLWTQNSGGTWFSQMILSNVDGVVGQWNTYEGYFKLPAAGGGATLWGCQAYRWPSSAKVGLAGARNVIVTRVTRDDDDKVENAAFGVNGMRANTLSDNGNFSNPVMQLLNLKPKNVVTSNELRERT
Physico‐chemical
properties
protein length:377 AA
molecular weight: 42164,58000 Da
isoelectric point:5,49448
aromaticity:0,12467
hydropathy:-0,34695

Domains

Domains [InterPro]
DC_0912
STR
1–377
DC_0912
PS52031
LEC
23–198
PS52031
NP_932575.1
1 377
Architecture
STR
STR 1-377
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
NP_932575.1
1 377
Domain Start End Length (AA) Confidence
N-terminal 1 165 165 0,0053
Central domain 166 364 200 0,2821
C-terminal 365 377 12 0,8711
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-165
Central
166-364
C-terminal
365-377

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 44RR2.8t
[NCBI] 		2907963 Uroviricota > Caudoviricetes > Pantevenvirales > Biquartavirus > Biquartavirus 44RR2
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_932575.1 [NCBI]
Genbank nucleotide accession
NC_005135 [NCBI]
CDS location
range 148973 -> 150106
strand +
CDS
ATGGCGACTCAATTCATGGCCCACCTCGGGCCATCTTATGTTGAAACTAGCCACCTAAGTGAAAACAATGCGATTAAGTATAAGTTGGAAGCATTAGGTTCTAACGCTGACTCAACTGTAAAAGTCCCGTTCATTAAGTTGAACGGGGCAAGTCGTTTGTCTTCATATAGTCGTGGTATAACTGCAGTAACAATAAGTCCTACTGGTGTTGCTAGTAATCAGGCAACATTTGATCTGTACACCCGTCCGGAACACTTTGACACACTCAGGTCATATTTGATGTCTGCACCGTCAAATAATATCGTGGTTCTAGTGTCATATGATGCGATGAAATCTACTGAAGCATTTGACGAATTCATGTACCAATATGGCTCTCGCTCATGGCCAGGTGTCCCTTACCTGAATAAGGTATTGCCGGATTCTCGGTTGTATAGGAGTTCGTATGTCGCTATTTTTAATACGTCTCTTAAGCGTTTTTGCTACGAGAATTTCGTTGGAAATGATTACACAGCAACATCGGATACCTCCGCATATCTCGAAGTAGTTTTTGATACGGTTGAAGATATTGGCGCCTGCGGAACGCCTGAACGTAAAGTTGATGATATCAATGAATATTTCAGCCGTCCAGACGATTATGCTTTCATCAGATATTTCCCAACTGAAAATATAACCAACTGGGAAGCAATCTATCATGTCAAATGTGAGTTATATAACGATCAAGTTCTAAAAGATGCAAACGGCCATGCCCGGCTATATTTGTGGACTCAAAATAGCGGCGGTACTTGGTTTTCGCAAATGATACTGTCAAACGTAGATGGCGTTGTTGGTCAATGGAACACATATGAGGGGTATTTCAAACTACCGGCCGCAGGCGGCGGTGCTACATTATGGGGCTGCCAGGCATACAGATGGCCGTCAAGTGCTAAAGTTGGTTTAGCTGGTGCTAGAAACGTCATAGTTACCCGAGTAACTCGAGATGACGATGACAAAGTTGAAAATGCTGCTTTTGGTGTTAACGGTATGAGAGCGAACACATTGTCTGACAATGGAAACTTCTCAAACCCTGTAATGCAACTGCTTAATTTGAAACCGAAAAACGTTGTTACTTCAAACGAACTTCGGGAACGTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
37cf52fab9c503815094d23682a86eb196923b743f12b77d48f2ba9c0a5aac7b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6247
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome of Aeromonas salmonicida Bacteriophage 44RR2.8t Nolan,J.M., Petrov,V., Bertrand,C., Krisch,H.M. and Karam,J.D. 2016-01-01 — GenBank