Protein

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Genbank accession
YP_008857662.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPLPKPDDLSVIWASIGQATKPAPNKIMTGWTNEIPPYQWHNWYFQRVDKALAHINQQGIAMWDAATTYEGGTSLAKGSDGVVYKAKRSSRGVDPVSPASNLDWEPAFERYGEAAKVNSQLQSLKKDYETLANISNIAMARQNLSVYSKAETDVRYAFKAGAAGQVFAVAPATAGSHAVPRDQLPALYPRAGAAPGIIALASQAEGYAGTVENKAIAPSVLKALTLYKSQNLADLPDKQLARSNLGLASSAVLPENTWLKRNDNLADVPNKAAARANLGITSSALLPESTWLKTASNLADIPNKPTARANLGITDTATLPVGDVMRKSENLAGLTNVPQARANLGLGTMATANSGDFLTSANNLGDVRDAQAARNNLGLKGCATLDALGLPNGATGLDFQSEQSSSASGWAALPNGLILQWGQGPALYDDRSTIVRLPRPARILNVSVTVMGTFNASIGPGAYMTDQWSNTQFRVSCNWGNWAYPFCWFAITTIYGM
Physico‐chemical
properties
protein length:497 AA
molecular weight: 52911,07520 Da
isoelectric point:8,89330
aromaticity:0,07847
hydropathy:-0,21127

Domains

Domains [InterPro]
DC_2128
STR
2–278
DC_2128 DC_1977 G3DSA:2.60.40.3940
Coil
Unmapped
114–134
Coil DC_0362
IPR054075
RBD
413–491
IPR054075
YP_008857662.1
1 497
Architecture
STR
STR
RBD
STR 2-278 | STR 284-325 | RBD 326-497
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PAK_P3
[NCBI] 		981431 Uroviricota > Caudoviricetes > Vandenendeviridae > Nankokuvirus PAKP3 >
Host Pseudomonas aeruginosa PAK
[NCBI] 		1009714 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008857662.1 [NCBI]
Genbank nucleotide accession
NC_022970.1 [NCBI]
CDS location
range 21366 -> 22859
strand +
CDS
ATGCCGCTTCCAAAACCTGACGACCTGTCCGTAATCTGGGCATCTATTGGGCAGGCGACTAAGCCTGCTCCAAACAAGATCATGACAGGCTGGACCAACGAAATCCCTCCCTACCAATGGCACAACTGGTATTTCCAGAGGGTAGATAAGGCCCTGGCCCACATCAACCAACAAGGCATCGCCATGTGGGATGCCGCCACCACTTACGAAGGGGGTACCAGCCTGGCCAAAGGGTCAGATGGGGTGGTGTACAAGGCCAAACGGTCCAGCCGAGGTGTTGACCCCGTATCTCCGGCAAGCAACCTGGACTGGGAACCCGCATTCGAGAGGTACGGTGAGGCTGCGAAAGTAAATTCCCAGCTTCAATCCTTGAAAAAGGATTATGAAACACTGGCCAATATCAGCAACATTGCCATGGCCAGGCAAAACCTCTCGGTATATTCCAAAGCCGAGACAGATGTCCGATACGCCTTCAAGGCTGGGGCAGCCGGGCAGGTGTTTGCTGTAGCCCCTGCCACAGCAGGAAGCCATGCAGTCCCAAGGGATCAGTTGCCAGCCTTGTACCCCCGAGCTGGAGCAGCACCAGGCATCATCGCTTTGGCAAGCCAGGCGGAAGGGTACGCTGGCACCGTTGAGAACAAGGCGATTGCACCAAGTGTCCTGAAAGCACTCACCCTGTATAAGAGCCAGAATCTGGCGGACCTCCCGGATAAGCAGCTTGCCCGGTCTAACCTGGGCCTGGCCAGCTCTGCTGTGCTGCCGGAGAACACCTGGCTCAAGCGTAATGACAACCTGGCGGATGTTCCCAACAAAGCCGCAGCACGGGCTAACCTGGGGATCACGTCTTCAGCGCTCCTCCCTGAGAGCACCTGGTTGAAGACTGCTAGCAACCTGGCTGATATCCCCAACAAGCCCACAGCCCGGGCTAACCTGGGGATCACAGACACTGCTACACTGCCTGTAGGCGACGTAATGCGCAAGAGTGAGAACCTGGCAGGGTTGACCAACGTCCCTCAAGCACGGGCTAACCTGGGTTTGGGGACTATGGCAACTGCCAACTCGGGAGACTTCCTAACCTCGGCGAACAACCTTGGAGATGTCAGGGATGCACAAGCAGCCCGGAACAACCTGGGCTTGAAAGGATGTGCTACTCTGGACGCTCTGGGTCTACCGAACGGAGCAACTGGCCTAGACTTCCAATCGGAACAATCCTCCAGTGCATCCGGCTGGGCAGCTCTTCCGAACGGGTTGATCCTTCAGTGGGGGCAAGGGCCTGCATTGTACGATGATCGGTCTACGATTGTACGGCTGCCACGCCCGGCTCGAATCCTGAACGTGAGCGTAACTGTGATGGGCACTTTCAACGCCTCTATCGGGCCAGGCGCCTACATGACGGACCAGTGGAGTAATACTCAGTTCCGGGTGTCGTGCAACTGGGGCAACTGGGCGTATCCGTTCTGCTGGTTCGCTATCACCACCATCTACGGGATGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d7da28c3097dc614f00dbeb7061da106cf572311e01f1b7848ad9fb65330f352
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7381
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50