Protein

Genbank accession
AVO23975.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
TF
Evidence Phold
Probability 1,00
Protein sequence
MQSINQPQKILVPFAQNDSAKVEIPVTTTSPGRFSQTLGSPPETALPPESGGTPPQLPDFNGAMNQQSRLAWWMMAGGRFAFDSTWANNTYVNGYPRGAVLPAAIGAGLIGMGEWYNNAEANTADPDVNGAGWVPGYHYGVTALTGQTGGTLTLSPAQAAKRTLTIAGTLTSNLVVVLPAWVYTWRIVNNTGGAYTVTVKNAATTGVVIPQNGVSTTVHCDGTQVSFDSPNIPAAVLSTQPMQLGQATGRLLAVRRFAVAGATTYTPTTGTNTVIVEVVGAGASGAGTVAALSGQAAAGGGGGGGAYAKARIVSGFAGVTITVGAPGVSAAPGNAGQAGGASSFGSLVVCPGGAGGPQGQGSSSANYSAPGLGAAAPTFGGSADVIVAASGAAGSPGLLFSSSIVISGNGANTPYGSGGGGAGSSTAGQTGTGLSAGGQGSGGGGGFSTSGGSPGSGGSGGGGLVLVWEYA
Physico‐chemical
properties
protein length:471 AA
molecular weight: 45390,70990 Da
isoelectric point:6,71959
aromaticity:0,06794
hydropathy:0,10764

Domains

Domains [InterPro]
IPR049304
260–467
IPR049304
AVO23975.1
1 471
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XPP6
[NCBI] 		2099857 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVO23975.1 [NCBI]
Genbank nucleotide accession
MG944231 [NCBI]
CDS location
range 23184 -> 24599
strand +
CDS
ATGCAATCGATCAATCAGCCGCAAAAAATCCTCGTACCCTTCGCCCAAAACGATAGTGCGAAGGTCGAAATTCCGGTGACGACCACGAGCCCGGGGCGTTTCTCTCAGACCTTGGGATCGCCGCCGGAGACTGCGCTGCCGCCCGAGTCCGGCGGTACCCCTCCTCAGCTGCCGGATTTTAACGGCGCGATGAATCAACAGTCGCGCCTTGCGTGGTGGATGATGGCCGGCGGTCGTTTTGCGTTCGACTCGACCTGGGCCAATAACACCTACGTCAACGGCTATCCGCGTGGTGCGGTGCTGCCGGCGGCAATCGGTGCCGGTCTGATCGGCATGGGCGAGTGGTACAACAACGCCGAAGCTAACACCGCCGATCCGGACGTCAACGGCGCAGGTTGGGTGCCGGGCTATCACTACGGCGTGACGGCGTTGACGGGCCAGACCGGCGGCACGCTGACGCTATCTCCGGCGCAGGCGGCTAAGCGCACGCTCACAATCGCCGGCACGCTGACATCGAACCTCGTCGTTGTCCTGCCGGCCTGGGTCTACACCTGGCGCATCGTCAACAACACCGGGGGCGCGTACACCGTCACCGTAAAAAACGCCGCTACGACCGGCGTGGTCATCCCTCAAAACGGGGTTTCGACGACCGTACATTGCGACGGCACGCAGGTCTCGTTCGACTCGCCTAACATCCCGGCTGCGGTGCTGTCCACGCAGCCAATGCAGCTCGGTCAGGCGACAGGTCGTTTACTGGCCGTGCGCCGCTTTGCCGTCGCGGGCGCGACGACCTACACACCGACAACCGGTACTAACACCGTGATCGTCGAGGTCGTGGGCGCAGGCGCGAGCGGGGCCGGTACCGTGGCCGCGTTGAGCGGGCAAGCCGCCGCAGGTGGCGGTGGCGGTGGCGGCGCCTACGCTAAGGCGCGCATCGTGTCGGGCTTTGCGGGCGTGACGATCACCGTCGGCGCGCCGGGCGTGTCGGCTGCACCGGGTAACGCAGGTCAAGCCGGTGGTGCATCGAGCTTTGGTAGTTTGGTCGTGTGTCCGGGCGGAGCGGGCGGCCCGCAAGGTCAGGGCAGTTCGTCGGCGAACTACTCCGCCCCTGGTCTAGGTGCCGCGGCGCCGACCTTTGGCGGTAGCGCCGACGTGATCGTGGCCGCAAGCGGCGCGGCAGGCAGCCCGGGTCTGTTGTTCAGCTCGAGCATCGTCATCAGCGGCAACGGTGCTAACACGCCGTACGGTTCGGGCGGTGGCGGCGCGGGGTCGAGCACGGCCGGTCAGACTGGTACGGGGTTGAGCGCCGGCGGCCAGGGCAGCGGCGGCGGTGGCGGGTTCAGTACGTCGGGCGGTAGCCCTGGTAGCGGCGGATCGGGCGGTGGCGGCCTCGTACTCGTTTGGGAATACGCGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
ca6da9f050feab2d619fd3ac1cb10890d5c9290340aebe39bef384e66e83e866
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9015
Evidence 0,9015
Download PDB

Literature

Title Authors Date PMID Source
Isolation, characterization and comparative genomics of Xanthomonas oryzae pv. oryzae bacteriophages Varga,I., Molnar,J., Gazdag,A., Szucs,D., Doffkay,Z., Valappil,S.K., Papp,S., Pinter,R., Vera Cruz,C.M., Ricardo,O., Vizi,T., Schneider,G., Rakhely,G. and Kovacs,T. 2019-07-03 — GenBank