Protein

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Genbank accession
YP_013357152.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MATTPVLGLELMESNSLQPSVPFNSAMQLLDIVAQLTVQQFLQTPPATTNADIGKTWIVSGGATGAWAGQDGRLAVSTAANLWRFIVPRAGWRADVQTAIYRFDGSTWNVVSSGGFYVPGFISGLSLSWVDAHTVRVSAGTAHNQSADLNYRQDAAANLTVPTTASTFFYLYQYQNNQLEVSTTAPFTTPYAGSAMSKGGDTTRRYLGAVLTDSSGNVVKFQHDGDEILYTEGIARLLPGGTSTTFAAISVGSQVPVGSKTVILAMTNGSATVPFRVRPIGYRNALNQRMYGLTGSAYVVGPVPLTSGLNIEYQVDSGGSGNIDIAGYKLYR
Physico‐chemical
properties
protein length:332 AA
molecular weight: 35264,16310 Da
isoelectric point:6,83207
aromaticity:0,09940
hydropathy:0,00211

Domains

Domains [InterPro]
DC_0494
STR
1–330
DC_0494
IPR021251
STR
24–108
IPR021251
YP_013357152.1
1 332
Architecture
STR
STR 1-330 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XAJ2
[NCBI] 		1775249 Uroviricota > Caudoviricetes > Caudoviricetes incertae sedis > Xajduovirus XAJ2 >
Host Xanthomonas arboricola pv. juglandis
[NCBI] 		195709 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas arboricola

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_013357152.1 [NCBI]
Genbank nucleotide accession
NC_128954.1 [NCBI]
CDS location
range 22381 -> 23379
strand +
CDS
ATGGCTACTACTCCCGTTCTAGGTTTGGAATTGATGGAAAGCAATTCTTTGCAACCATCTGTGCCGTTCAACTCGGCAATGCAGTTGCTTGACATAGTTGCTCAGCTTACAGTGCAGCAGTTTTTGCAAACGCCGCCAGCCACAACTAACGCTGACATTGGCAAAACGTGGATTGTCTCAGGCGGCGCTACGGGTGCATGGGCGGGCCAGGACGGCCGCCTAGCTGTCAGCACAGCCGCGAACCTATGGCGCTTCATCGTGCCCCGTGCAGGCTGGCGTGCGGACGTACAGACGGCCATCTATCGTTTTGATGGTTCAACTTGGAATGTAGTTTCATCCGGCGGTTTTTACGTGCCCGGCTTTATCAGCGGTTTGTCGCTTTCTTGGGTCGATGCACATACGGTGCGAGTGAGTGCAGGAACTGCCCACAATCAGTCGGCGGATTTGAATTATCGCCAAGATGCCGCAGCAAACTTGACGGTGCCGACAACCGCTAGCACTTTCTTTTATTTGTATCAGTATCAAAATAATCAGCTTGAAGTTTCTACAACTGCGCCTTTTACAACTCCTTATGCCGGTTCGGCAATGAGCAAAGGTGGCGACACCACTAGGCGCTATTTGGGTGCAGTTTTGACAGATAGCAGCGGCAATGTGGTTAAATTTCAGCATGACGGTGACGAAATTTTATACACCGAAGGCATTGCGCGATTGCTGCCGGGCGGCACTTCTACAACATTTGCAGCCATAAGTGTAGGTTCGCAGGTTCCAGTCGGTTCAAAAACTGTTATTTTGGCAATGACTAATGGTTCTGCAACTGTACCTTTCAGAGTTCGCCCCATAGGCTATAGAAATGCTTTAAATCAGCGAATGTATGGCCTGACCGGAAGCGCCTATGTTGTAGGCCCTGTCCCTTTAACAAGCGGTTTGAATATTGAATACCAAGTTGACAGCGGTGGCAGCGGCAACATTGACATTGCTGGTTACAAACTTTATCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b20cd62ebdf38aaf11acee363c9104ddc1646b5357cc5f5721d257d94a7cd0a4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8786
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages of Xanthomonas arboricola pv. juglandis: Characterization of two phages Domotor,D., Frank,T., Rakhely,G., Doffkay,Z., Schneider,G. and Kovacs,T. 2018-01-02 — GenBank