Protein

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Genbank accession
QFP93377.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
METMSVQRGLMELKTLGNRITRATQQSFVNFYVGDKGAPQGFKTPDEFSSYAQGRYDSATDLIKRRNAIKAAIIQSNAVTTVTVAGKQMTVAEAIDRKDSIVHEKVLLQQLQSQFSEITRRVAAQQQVLDARIDKVLEEEGGKDRKVDDADHTRIVKNAESRYKPNLVDPIGIRKVIEQMEEDINSFELDVDASLSEINARTDIEFEVK
Physico‐chemical
properties
protein length:209 AA
molecular weight: 23520,23830 Da
isoelectric point:5,40240
aromaticity:0,05263
hydropathy:-0,53732

Domains

Domains [InterPro]
DC_0027
STR
1–208
DC_0027
Coil
Unmapped
108–128
Coil Coil
QFP93377.1
1 209
Architecture
STR
STR 1-208 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Xoo-sp15
[NCBI] 		2608370 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFP93377.1 [NCBI]
Genbank nucleotide accession
MN364664.1 [NCBI]
CDS location
range 91740 -> 92369
strand -
CDS
ATGGAAACAATGTCAGTTCAACGTGGTTTAATGGAGTTAAAAACTTTAGGTAATCGTATCACTCGTGCCACTCAACAATCTTTCGTGAATTTCTACGTAGGTGACAAGGGTGCTCCACAAGGATTCAAAACACCTGATGAGTTTTCTTCATATGCTCAAGGTCGTTACGACTCTGCTACGGACTTGATTAAACGCAGAAACGCAATTAAAGCTGCTATTATCCAGTCTAACGCAGTAACTACGGTTACTGTAGCAGGTAAGCAGATGACAGTTGCAGAAGCAATTGACCGTAAGGATTCAATTGTTCACGAGAAAGTTCTTTTACAACAACTGCAATCGCAGTTCAGTGAGATTACTAGACGTGTAGCCGCTCAACAACAAGTGTTAGATGCTCGAATTGATAAGGTTTTAGAAGAGGAAGGTGGAAAAGACCGTAAGGTTGATGACGCTGACCACACTCGTATTGTAAAAAATGCAGAGTCTCGCTACAAACCAAATCTAGTTGATCCTATCGGTATCCGTAAAGTGATTGAACAGATGGAAGAGGACATTAACTCATTCGAGTTGGATGTTGATGCTTCGTTATCTGAAATCAACGCTCGTACGGACATCGAGTTCGAAGTGAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
13f7fb04703bb1a2efd440e257182e1a8eaeb337bc6cdbafce32458cbf313cea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9650
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a noval phage sp-15 Nazir,A., Dong,Z., Liu,J., Tong,Y. and Peng,D. 2021-07-02 — GenBank