Protein

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Genbank accession
AQN32219.1 [GenBank]
Protein name
putative tail spike with endopeptidase domain
RBP type
TSP
Evidence RBPdetect
Probability 0,54
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MIHVLNFNSEIIDFISQDDSAIIRAEHTRSKEDKSELLNITLLSERAEHFKERNRVIIQEPNGAYKEFIINRLEEEGQYLEIECDASYVEDIGKAKPIPAGKFTKMTVNEALSETLKDSGWEVGLCEYGGIKSMSWTSVRTPHEMISQLTTTYKLEPDYVIEIKGNEVVSRKVNMIQPKPLFEGKEIIYGKDLISMKRTVDMSEVKTALFAFGPEKDDGTRISTVVVDDEAQQQFNLPKRYLWGIYEPESDDQDMTLDRLLTLSKTELNKRKSSALSYEIDAFDLKKEYPHEIIRFGDIVRIKNPDYTPSLYAESEVVGFVHELISDDLTWQFGNVIEYKEDDLLKYFRSRMEEIEKKLNNNINNSNTIITDRIEEEIERLQRTIHRGETPPSPEEGDFWYDTTNPKVAVLREFKNGRWKNASAHDVEQIGGMTKEAIIYNEINGTFLSISVQHAKITNEIYEVLNSEYLVDEGIRDWLNNELNILRDIYSNIFSSLDSMTEETATIGKLMDTQAMIVQYRGQAYALNTAFLNARQAIDERFKLLQSQYTEEKFNEAMQNVADKFGFEYTEDGFLVGDGSLISGAIQALREDTEEQFKQVVKSNDYETDKKGIIELLNSADSAREQLDKLIKDRVTLTEYNKMKIGTENLLLNSLYQDKSTSSSLTHAFFRYYLTTPLKVGKTYTFTCNFNTTDTNQSGRTSVRGYSPDNGLIDVDIVEGKIKVTFVAKVASTAFLVYKDVAGTSAHTLNVNVTNALLVEGNKIGDYSQAPKEQEERLETIETSIEQNGKDIKLKASEEEFNKTKQTLSKIATEILMNTTTGVTISYDDNGNVNDVNVGPEGVKINTDVFEINDGDVIVKDGVTTIKEAYIDKLFSNKATIDYLNSVDITAKRIQAVDNKATVNIENGVITMNRTDGHKLDIGINGIVMTNPNGSTRFSMDRLLVTSAALGTSNSNVYLAAQQGYEVRAVDITQIPSDGAWDSYRYVPVRALAFVGNKLMTNGGTNLYLGTDAEVRVTARGGYNGDDTVYRNMRALGYYGDFIETNSVTSGVNIYIRPDSNAEVRFTSKGTTDNYVDIRAKNVYGSSLISRDSGNLYLGTDDGIRVTGKSLYNGGSPIWRNLAANGLYANFLDINPNTNAVNLYLRADGEVRITKRNTTDSYIPIRAASATWTSSERYKYDIENWDIDVLEHLVDRVQLYSYKLYSEMEEDSQRVRHGVVLERETPDEWKNGDGVDSYEMTAWCLKAIQELTKKVRTLETELEAKL
Physico‐chemical
properties
protein length:1266 AA
molecular weight: 143193,50910 Da
isoelectric point:4,85720
aromaticity:0,08768
hydropathy:-0,49976

Domains

Domains [InterPro]
DC_1353
STR
1–796
DC_1353
IPR007119
Unmapped
25–315
IPR007119 Coil
DC_0850
STR
631–1266
DC_0850
AQN32219.1
1 1266
Architecture
STR
STR 1-1266
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AQN32219.1
1 1266
Domain Start End Length (AA) Confidence
N-terminal 1 682 682 0,9433
Central domain 683 1157 476 0,5997
C-terminal 1158 1266 108 0,9288
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-682
Central
683-1157
C-terminal
1158-1266

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage phi575
[NCBI] 		1955176 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AQN32219.1 [NCBI]
Genbank nucleotide accession
KY389063 [NCBI]
CDS location
range 32300 -> 36100
strand +
CDS
TTGATACATGTACTTAATTTCAATAGTGAAATTATTGATTTTATCAGTCAAGATGATTCTGCAATCATTCGTGCAGAACACACTAGAAGTAAAGAAGACAAAAGCGAACTGTTAAATATCACCTTACTTTCAGAAAGGGCAGAACATTTTAAAGAACGAAATAGAGTTATAATCCAAGAGCCTAATGGTGCATATAAAGAATTTATAATTAATAGACTTGAAGAAGAGGGGCAGTATCTAGAAATAGAATGTGATGCTTCATATGTAGAAGACATTGGTAAAGCAAAACCTATACCAGCCGGTAAGTTTACGAAAATGACTGTAAACGAAGCACTTTCAGAAACGTTAAAAGATTCAGGTTGGGAAGTTGGTCTTTGTGAATATGGTGGGATCAAATCAATGTCATGGACTTCTGTACGAACACCTCATGAAATGATTAGTCAATTAACAACTACTTATAAATTAGAGCCAGACTATGTCATTGAGATTAAAGGTAATGAAGTCGTGAGTAGAAAAGTTAATATGATTCAACCGAAACCTTTATTTGAAGGAAAGGAAATCATATATGGTAAAGATTTAATCTCTATGAAAAGAACGGTTGATATGTCAGAAGTTAAAACAGCTTTATTTGCTTTTGGGCCTGAAAAAGATGACGGAACACGTATCAGTACAGTTGTAGTAGATGATGAAGCACAACAACAATTCAATTTACCAAAGCGTTATTTATGGGGTATCTATGAACCTGAATCAGATGACCAAGATATGACTTTAGATAGACTTTTAACGTTGTCTAAAACAGAGTTAAATAAACGTAAGTCTTCAGCATTAAGCTATGAAATAGATGCATTTGATTTAAAGAAAGAGTACCCTCACGAAATTATTAGATTTGGAGATATTGTTAGGATTAAAAATCCAGATTACACGCCAAGTTTATACGCAGAAAGTGAAGTTGTTGGTTTCGTACACGAATTAATTTCAGACGACTTAACATGGCAGTTTGGAAATGTAATCGAATATAAAGAAGATGATTTATTAAAATATTTCAGAAGTAGAATGGAAGAAATCGAGAAGAAATTAAATAATAACATCAACAATTCTAATACGATTATCACAGATAGAATTGAAGAAGAAATCGAAAGATTACAAAGAACTATTCACAGAGGAGAAACACCACCAAGCCCTGAAGAAGGCGATTTCTGGTATGACACAACAAATCCAAAAGTTGCAGTATTACGAGAATTTAAAAATGGACGTTGGAAAAATGCGTCGGCACACGACGTTGAACAAATCGGTGGTATGACGAAAGAAGCTATTATATACAACGAGATTAACGGAACGTTTCTTTCAATATCTGTACAACATGCAAAAATAACTAACGAAATATATGAGGTTTTAAATAGTGAATATTTAGTTGACGAGGGTATAAGAGATTGGCTTAACAATGAACTAAATATACTTCGTGATATTTATTCAAACATTTTTTCATCACTAGACAGCATGACAGAAGAAACGGCCACGATAGGAAAATTAATGGATACGCAAGCCATGATAGTTCAATATCGTGGTCAAGCGTATGCACTAAATACAGCGTTTCTTAATGCTAGACAAGCCATTGATGAACGTTTTAAATTACTTCAATCGCAATATACAGAAGAAAAATTCAACGAAGCCATGCAAAATGTAGCTGATAAGTTTGGATTTGAATATACAGAAGATGGTTTTCTTGTTGGAGACGGTTCTTTAATCAGTGGTGCAATTCAAGCATTACGTGAAGACACTGAAGAACAATTCAAGCAAGTGGTGAAAAGTAATGATTATGAAACGGATAAGAAAGGCATTATCGAACTCTTAAATAGTGCTGATAGTGCAAGAGAACAATTAGATAAATTGATAAAAGACCGTGTAACTTTGACTGAATACAATAAGATGAAGATAGGTACAGAAAATCTATTATTAAATAGTTTGTACCAAGACAAGTCAACAAGTAGTTCTTTAACTCATGCCTTTTTCAGATATTATTTAACGACACCTTTAAAAGTCGGTAAAACTTATACATTCACTTGTAACTTTAATACAACAGACACTAATCAAAGTGGTCGAACTTCTGTCAGAGGATACTCACCAGACAATGGTTTAATCGATGTTGATATCGTTGAAGGTAAAATAAAAGTAACGTTTGTTGCTAAAGTAGCAAGTACTGCTTTCTTAGTCTATAAAGATGTTGCAGGTACTTCAGCACATACATTAAACGTAAATGTTACTAATGCATTGCTAGTTGAAGGGAATAAGATTGGCGATTATTCACAGGCACCAAAAGAACAAGAAGAACGTCTTGAAACAATAGAAACGAGCATAGAACAAAATGGTAAAGATATTAAATTAAAAGCTAGTGAAGAAGAATTTAATAAAACCAAACAAACCTTATCTAAGATAGCAACTGAAATCCTGATGAACACAACAACGGGTGTCACTATTTCTTATGATGACAATGGCAATGTTAATGATGTAAATGTTGGACCAGAAGGCGTTAAAATCAACACTGATGTTTTCGAAATCAACGATGGAGATGTCATTGTTAAAGATGGTGTCACAACAATTAAAGAAGCTTATATTGATAAGTTATTTTCTAATAAAGCGACCATTGATTACTTAAACAGTGTAGATATAACGGCCAAACGTATTCAAGCAGTTGATAATAAAGCGACTGTTAACATCGAAAATGGTGTTATAACGATGAATCGCACTGATGGCCATAAACTTGATATTGGAATTAATGGAATAGTCATGACGAATCCAAATGGATCTACACGATTTAGTATGGATAGGCTTTTAGTGACAAGTGCAGCATTAGGTACTTCTAATTCCAATGTGTATTTAGCAGCTCAACAAGGCTATGAAGTTCGAGCAGTTGATATTACACAAATACCAAGTGATGGTGCTTGGGATAGCTACCGTTATGTACCTGTAAGAGCATTAGCATTTGTAGGTAATAAACTTATGACAAATGGCGGAACTAATCTTTATCTAGGTACAGATGCAGAAGTTAGAGTTACAGCACGTGGTGGCTATAATGGCGATGATACAGTTTATAGAAACATGCGTGCTTTAGGTTATTATGGAGATTTTATAGAAACGAACAGTGTAACTTCTGGTGTAAACATTTATATACGACCAGATTCAAACGCTGAAGTACGATTTACTTCAAAAGGTACAACTGACAATTATGTTGATATTAGGGCAAAAAACGTTTACGGAAGTTCTTTAATCTCTCGAGATTCTGGAAATTTATATCTAGGTACAGACGACGGTATAAGAGTTACTGGAAAATCACTATATAACGGGGGCAGTCCAATATGGCGTAATTTAGCGGCAAACGGATTATATGCCAATTTCTTAGATATAAACCCAAATACAAATGCAGTAAACCTTTATTTAAGGGCAGACGGCGAAGTTCGAATAACTAAAAGAAATACGACTGATAGTTATATACCTATCAGAGCAGCAAGTGCCACGTGGACGTCTTCTGAACGTTATAAATATGATATCGAGAATTGGGATATAGATGTATTAGAACATTTGGTTGATCGTGTTCAGTTATATAGTTATAAACTATATTCAGAAATGGAAGAAGACAGCCAACGAGTTAGGCATGGTGTTGTCTTAGAAAGAGAAACGCCAGACGAATGGAAAAACGGAGACGGTGTCGATTCTTACGAAATGACAGCATGGTGTCTTAAAGCTATACAAGAATTAACTAAAAAAGTCCGCACATTAGAAACGGAATTGGAGGCAAAATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2dd3e108c470dc0c5ed0a5664f481541908493798646927d484e074f0363dc94
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2776
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Staphylococcus sciuri bacteriophages double-convert for staphylokinase and phospholipase, mediate interspecies plasmid transduction, and package mecA gene Zeman,M., Maslanova,I., Indrakova,A., Siborova,M., Mikulasek,K., Bendickova,K., Plevka,P., Vrbovska,V., Zdrahal,Z., Doskar,J. and Pantucek,R. 2017 28406168 GenBank