Protein

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Genbank accession
YP_009042297.1 [GenBank]
Protein name
major tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,68
Protein sequence
MQEMLVLPGGGDPKKYSTWFELDFTKYPLGTFSGFTDRGITFNRTAGTSATVLDEGLPAMDFVGDGALSGGTTPDKLLNNDWKITMNLKVKAAATNPMIFVGRSIQGNGSGTWIANMLSNGYLDWWYNSNRVNAGPAVTKGVYHEIIFESINKSLTVTVDGSPTINNKAIPDLADGTGFNLMIGGSQDQAMYHSRCLMRSIKIETKKR
Physico‐chemical
properties
protein length:208 AA
molecular weight: 22645,48690 Da
isoelectric point:7,79038
aromaticity:0,09615
hydropathy:-0,25433

Domains

Domains [InterPro]
IPR013320
STR
50–190
IPR013320
IPR013320
STR
58–190
IPR013320
PF13385
LEC
70–189
PF13385
G3DSA:2.60.120.200
STR
72–207
G3DSA:2.60.120.200
YP_009042297.1
1 208
Architecture
STR
STR 50-207 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage CR8
[NCBI] 		1327934 Uroviricota > Caudoviricetes > Vequintavirinae > Certrevirus CR8 >
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009042297.1 [NCBI]
Genbank nucleotide accession
NC_024354 [NCBI]
CDS location
range 46201 -> 46827
strand -
CDS
ATGCAAGAAATGTTGGTACTGCCGGGAGGCGGAGATCCGAAAAAGTACAGCACTTGGTTCGAGTTGGACTTCACCAAGTATCCCTTGGGCACATTCTCAGGATTCACTGATCGCGGGATAACGTTCAACAGGACCGCCGGAACATCCGCGACGGTTCTTGACGAGGGCCTGCCAGCGATGGATTTTGTTGGAGATGGGGCATTGAGCGGAGGGACCACCCCAGACAAGCTGCTAAACAATGACTGGAAGATCACCATGAATCTGAAGGTTAAGGCGGCGGCAACAAACCCAATGATCTTTGTGGGGAGGTCTATTCAAGGAAACGGATCTGGCACTTGGATCGCCAACATGCTGAGTAACGGATACCTTGATTGGTGGTATAATTCCAACAGGGTCAATGCAGGCCCCGCCGTGACAAAAGGTGTTTATCACGAGATAATCTTCGAGTCTATTAACAAGAGCCTCACTGTAACTGTTGATGGCTCTCCGACGATAAACAACAAAGCCATTCCAGATCTTGCAGACGGGACAGGTTTTAATCTCATGATTGGTGGTTCTCAAGACCAAGCTATGTATCATTCCCGGTGCTTGATGCGCTCAATCAAGATTGAAACCAAGAAAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e79e84481081b152f754bf9a6d92365efe91e7f81151258e8b9163713189de56
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8580
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Cronobacter sakazakii Bacteriophage CR8 Kim,Y., Shin,H. and Ryu,S. 2012-06 — GenBank