Protein

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Genbank accession
QIG68453.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAERKVYSYRKSKRTLGTGKKISSLVSYITTYDYIAGDIMADGVVQYRLGSLKYGTDRRALMRTPGTVPHLEIKFGAGSTPPVNPGPTPSLRIQDTSNLLTLYAVKTMVTGYTGPLVTVCAIGAATTPPLTVDVMAGTDGETPDYTAAIAAFGVRFAVHIYHDQLPGGNDAVASTTSRHIIDTTKGIGAIAADIGGSPYIMPNGIVANAQNATIMQVSEDRGTQLAGMVGASLGNTGATAPYVWLGAATGIQGTGGGGSAKNLRRAPFADRPYFKAVRGTATDSKFWRNMDSGAPTSAGVLSANTTATAGGSIGGSRNGTASQAAQYTSKSVIYATIFGNGLMTDAQIENDIRVSCIDTFDLRVDDYTTLVCFIGDSIGWGQATTDAENFPYYLNKKLIAAGITNVAITNPSTAAALLSAAYAGRQDWRDLRETGKKFKIIIQRSTNDFGTTTITAANHWTTYMLPMIQYYKAVAHAANTSGFIEVAVETIPARQDTAWVADAQKEVERLAFNQLVRDNAATYGYTVLDRANNPTMADPTNTTYFNSDKLHITSAGTSSNVDYEWANGLQTFITS
Physico‐chemical
properties
protein length:575 AA
molecular weight: 61059,85260 Da
isoelectric point:8,17867
aromaticity:0,08696
hydropathy:-0,14470

Domains

Domains [InterPro]
IPR036514
STR
364–562
IPR036514
SSF52266
STR
371–557
SSF52266
QIG68453.1
1 575
Architecture
STR
STR 364-562 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM33
[NCBI] 		2509765 Uroviricota > Caudoviricetes > Autographivirales > Cuernavacavirus > Cuernavacavirus RHphTM33
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG68453.1 [NCBI]
Genbank nucleotide accession
MN988492.1 [NCBI]
CDS location
range 41010 -> 42737
strand +
CDS
ATGGCAGAGCGTAAGGTTTACTCGTATCGTAAGAGTAAACGCACGCTAGGGACTGGTAAGAAGATCAGCTCCCTAGTGTCTTACATTACGACCTATGATTATATAGCAGGAGACATTATGGCCGATGGTGTAGTCCAGTATAGGCTGGGAAGCCTTAAATATGGTACGGACCGGAGAGCCCTTATGCGAACTCCGGGTACGGTTCCACATCTAGAGATTAAGTTTGGTGCTGGCAGTACGCCTCCGGTTAATCCCGGCCCTACTCCGTCACTACGCATTCAAGACACCTCTAATCTGCTTACTCTGTATGCTGTAAAGACGATGGTTACGGGTTATACCGGCCCGCTCGTTACAGTCTGTGCTATTGGTGCTGCTACGACGCCTCCGCTTACTGTGGATGTTATGGCCGGTACTGATGGTGAGACGCCAGATTACACTGCTGCTATCGCTGCCTTTGGTGTGCGCTTTGCAGTACACATCTACCACGACCAATTGCCGGGCGGTAATGATGCAGTAGCATCTACAACCTCTAGGCACATCATTGATACGACCAAGGGTATTGGCGCTATTGCTGCCGACATTGGTGGCTCGCCGTATATAATGCCGAATGGTATTGTAGCCAATGCACAGAATGCTACTATTATGCAGGTCTCTGAGGACCGTGGTACGCAGCTTGCTGGTATGGTCGGTGCTTCGCTCGGTAACACTGGTGCGACTGCTCCTTACGTATGGCTTGGTGCTGCAACGGGTATTCAGGGTACTGGTGGCGGTGGCTCTGCTAAGAACCTTCGTCGTGCTCCATTTGCCGATCGTCCTTACTTCAAGGCAGTTCGTGGTACTGCTACGGACTCTAAGTTCTGGCGTAATATGGACTCTGGTGCACCTACTTCGGCTGGTGTTCTGTCGGCTAATACGACTGCTACAGCCGGTGGCTCTATTGGCGGCTCGCGCAATGGTACTGCTAGTCAGGCAGCACAGTATACCTCTAAGTCTGTTATCTACGCCACTATATTCGGTAATGGTCTGATGACCGATGCACAGATCGAGAATGATATCCGCGTAAGCTGTATCGACACCTTTGATCTGCGAGTAGATGACTATACTACGCTTGTCTGCTTCATCGGTGATAGTATCGGATGGGGTCAGGCTACTACGGATGCAGAGAACTTCCCGTACTACCTTAATAAGAAGCTTATTGCTGCTGGTATTACTAATGTAGCTATCACCAACCCGTCTACAGCTGCCGCTCTGTTGTCTGCTGCTTATGCTGGCCGGCAGGATTGGCGTGACCTTAGAGAGACCGGCAAGAAGTTCAAGATTATCATCCAGCGCAGTACGAATGACTTTGGTACGACTACTATCACGGCGGCTAACCATTGGACTACGTATATGCTGCCAATGATTCAGTACTATAAGGCTGTAGCACACGCTGCTAATACATCTGGCTTTATTGAAGTTGCCGTGGAGACTATCCCTGCACGCCAAGATACGGCTTGGGTTGCCGATGCACAGAAGGAAGTAGAACGTCTGGCATTCAACCAGCTAGTCCGTGATAACGCTGCTACGTACGGATATACGGTACTTGATAGGGCTAACAACCCGACAATGGCCGATCCTACGAATACTACGTACTTCAATAGCGATAAGCTGCACATTACTAGTGCTGGTACTAGCTCGAACGTAGATTACGAGTGGGCAAACGGTCTGCAGACCTTCATTACCTCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2eb5773baef165be820f962b9300c593dfa0d156562dcfa23c9ce45c870f7b2d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4816
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. — — GenBank