Protein

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Genbank accession
AFH14725.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MATLIQSHFQRAGDTYLLEDVDIRGGYRSVATITERNNIPPTARRVGMIVYCIADRTEYQLIGSIVNSAWSVRPPFSGKVHQVASVVDVGQLRQYNPYTFEQYAKARVIAWFNALPEASRILSHPMYFFKILCAVGAPASTAQGSVLPAGTEYLGEVTFVYDNAGSQVAVTFIDSSLVSISKTLMPLGDNVIAAMNEYADRKNAEANP
Physico‐chemical
properties
protein length:208 AA
molecular weight: 22803,66820 Da
isoelectric point:6,28897
aromaticity:0,10096
hydropathy:0,01827

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Lu11
[NCBI] 		1161927 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFH14725.1 [NCBI]
Genbank nucleotide accession
JQ768459.1 [NCBI]
CDS location
range 149277 -> 149903
strand +
CDS
ATGGCTACGCTTATTCAATCGCATTTTCAACGGGCGGGCGATACCTACCTTCTAGAAGACGTGGATATTCGCGGTGGTTATCGCAGCGTTGCGACGATTACCGAACGAAACAATATCCCGCCCACTGCGCGACGGGTAGGCATGATCGTTTATTGCATCGCTGACCGCACGGAATATCAGTTGATCGGATCAATTGTGAATTCTGCGTGGAGCGTGCGCCCTCCGTTCTCTGGTAAAGTTCATCAGGTTGCATCCGTTGTCGATGTTGGGCAGTTGCGCCAATATAACCCGTACACGTTTGAGCAGTATGCAAAAGCGCGGGTAATTGCGTGGTTTAATGCGCTGCCAGAAGCCAGTCGCATCCTTAGCCACCCTATGTATTTCTTCAAGATTTTGTGTGCTGTTGGGGCGCCTGCTTCAACTGCGCAGGGCAGCGTTCTGCCAGCGGGCACCGAGTATTTAGGCGAAGTCACTTTCGTTTACGACAACGCCGGTTCTCAGGTTGCCGTCACCTTTATTGATTCCAGTTTGGTTAGTATTTCCAAAACGTTAATGCCGTTGGGTGATAATGTAATCGCTGCAATGAACGAATATGCAGATCGGAAAAACGCGGAGGCAAACCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c7b5456cd63cb0941b7b56e9537ef55fa959f1b46756a3ec57410fb42c960d00
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5864
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of the giant pseudomonas phage lu11 Adriaenssens,E.M., Mattheus,W., Cornelissen,A., Shaburova,O., Krylov,V.N., Kropinski,A.M. and Lavigne,R. 2012 22570243 GenBank