Protein

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Genbank accession
WCZ57483.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MISNNAPAKMVLNSVLTGYTLAYIQHSIYSDYDVIGRSFWLKEGSNVTRRDFTGVDTFSVTINNLKPTTTYEVQGAFYDSIIDSELLNAQIGINLSDKQTFKMKSAPRITGARCESEPVDVGVGAPIVYIDTTGEADYCTIELKNNSNANNPWVKYYVGALMPTIMFGGVPIGSYKVRISGQISLPDGVTIDSSGYYEYPTVFEVRYNFVPPTAPVNIAFKAARIADGKERYDLRVQWDWNRGAGANVREFVLSYIDSAEFARTGWTKAQKINVGAAQSATIISFPWKVEHKFKVSSVAWGPDAQDVTDSAVQTFILNESTPLDNSFVNETGIEVNYAYIKGKIKDGSTWKQTFLIDAATGAINIGLLDAEGKAPISFDPIKKIVNVDGSVITKTINAANFVMTNLTGQDNPAIYTQGKTWGDTKSGIWMGMDNATAKPKLDIGNATQYIRFDGDTLRISSGVVIGTPNGDIDIETGIQGKQTVFIYTLGTSLPAKPTSPAYPPSGWSKTPPNRTSNTQNIYCSTGTLDPVTNQLVSGTSWSDVVQWSGTEGVDGRPGADGRPGADGKPGADGKPGADGRPGADGQRGPGMYSLAIANLTAWNDSQANSFFTSNFGTGPVKYDVLTEYKSGAPGTAFTRQWNGSAWASPAMVLHGDMIVNGTVTASKIVANNAFLSQIGVNIIYDRAAALSSNPEGSYKMKIDLQNGYIHIR
Physico‐chemical
properties
protein length:712 AA
molecular weight: 76740,09720 Da
isoelectric point:5,53159
aromaticity:0,09972
hydropathy:-0,25351

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549 IPR057549
IPR057551
STR
104–196
IPR057551 DC_1191
WCZ57483.1
1 712
Architecture
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-712
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCZ57483.1
1 712
Domain Start End Length (AA) Confidence
N-terminal 1 408 408 0,8424
Central domain 409 677 270 0,1773
C-terminal 678 712 34 0,9131
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-408
Central
409-677
C-terminal
678-712

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K20
[NCBI] 		3027609 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ57483.1 [NCBI]
Genbank nucleotide accession
OQ291032.1 [NCBI]
CDS location
range 81947 -> 84085
strand -
CDS
ATGATTTCAAATAATGCACCAGCTAAAATGGTCCTAAATAGCGTCTTAACTGGATATACGTTGGCGTATATCCAGCATTCTATCTACTCTGATTATGACGTTATAGGCAGGTCTTTTTGGCTTAAAGAAGGCAGCAACGTTACTCGTAGAGATTTTACTGGAGTTGATACCTTCTCTGTAACTATTAATAACCTAAAACCTACAACAACTTATGAAGTTCAGGGTGCATTTTATGATTCTATAATAGACTCTGAACTACTTAATGCTCAGATAGGTATTAATCTATCTGACAAACAAACTTTTAAAATGAAGTCAGCACCTAGAATTACGGGTGCTAGATGCGAATCAGAGCCTGTAGATGTAGGTGTTGGAGCGCCAATAGTTTATATAGATACTACAGGAGAAGCCGATTATTGTACTATAGAATTAAAAAATAATTCTAATGCTAATAATCCGTGGGTTAAATATTATGTTGGTGCATTGATGCCAACTATTATGTTTGGTGGTGTCCCAATCGGATCCTATAAGGTAAGAATTTCTGGACAAATATCCCTACCAGATGGAGTAACTATTGATTCATCTGGATACTATGAGTATCCTACTGTCTTTGAAGTTAGATATAACTTTGTACCTCCTACAGCTCCTGTTAATATTGCGTTTAAAGCTGCGCGTATAGCAGATGGTAAAGAACGCTATGATCTACGTGTGCAATGGGATTGGAATAGGGGTGCAGGTGCCAACGTTCGTGAATTCGTTCTATCCTATATAGATTCAGCAGAATTTGCTAGAACTGGATGGACTAAGGCACAAAAAATCAACGTGGGGGCTGCTCAGTCGGCAACAATTATATCATTCCCATGGAAAGTAGAGCATAAATTTAAAGTGTCATCTGTTGCCTGGGGACCAGATGCTCAAGATGTTACTGATTCTGCAGTACAGACATTTATATTAAATGAGAGCACACCGTTAGACAATAGTTTTGTTAATGAAACTGGTATAGAGGTAAATTACGCGTATATTAAGGGTAAGATCAAAGATGGATCTACCTGGAAACAAACCTTCCTAATAGATGCTGCTACTGGTGCAATTAACATTGGACTTCTAGATGCCGAAGGAAAAGCACCAATATCTTTTGACCCTATTAAAAAGATAGTTAACGTTGATGGAAGTGTAATAACTAAAACTATTAATGCTGCGAACTTTGTCATGACTAATTTGACTGGTCAAGATAACCCTGCAATCTATACTCAAGGTAAAACTTGGGGAGATACAAAATCTGGTATTTGGATGGGCATGGATAATGCTACTGCGAAGCCGAAACTGGACATTGGTAATGCTACACAGTATATTCGTTTCGATGGTGATACATTAAGAATTTCCAGTGGAGTTGTAATTGGTACACCTAATGGCGATATTGATATAGAGACAGGTATACAAGGTAAGCAAACAGTATTTATTTATACCCTAGGTACTTCATTACCTGCTAAACCAACAAGCCCTGCATACCCACCTTCTGGTTGGTCTAAAACTCCACCGAATAGAACATCTAATACTCAGAATATTTACTGCTCTACTGGTACTCTAGACCCTGTTACTAATCAATTAGTATCAGGAACCAGTTGGTCAGATGTAGTTCAATGGAGTGGTACTGAAGGTGTTGATGGTAGACCCGGAGCTGATGGTAGACCCGGAGCTGATGGAAAACCAGGTGCTGATGGAAAACCAGGTGCTGATGGGCGGCCAGGAGCAGATGGACAACGTGGTCCTGGAATGTACTCTCTTGCTATTGCTAATTTAACGGCATGGAATGATTCTCAGGCTAATTCGTTTTTTACATCTAACTTTGGTACTGGTCCTGTTAAATATGATGTATTAACCGAGTATAAAAGTGGGGCACCAGGAACAGCATTTACTAGGCAGTGGAATGGTTCAGCATGGGCTAGCCCTGCAATGGTTTTACATGGTGATATGATAGTTAATGGTACAGTAACTGCTAGTAAAATTGTTGCTAATAACGCTTTCTTATCACAAATTGGTGTAAATATTATATATGATCGTGCAGCAGCATTATCCTCTAATCCAGAGGGATCTTACAAAATGAAGATAGACCTGCAAAACGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
28af543d596930e8201f27187c0a24f2813f0013085337ba3f98d163c0368181
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7785
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K20 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank