Protein

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Genbank accession
XVC01760.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MANPIFIPIAFAANGVKNPIQKVRQVGQDPEDFTWDEGSPLITMTKIEDGGKAPKGQDFNGVLNALSEHVIYGQNGNRYTWSQDVIDEFGGYALGAIVQSDDTTKEFRSLVANNTVNPNNGLGGAWEVYSGQGSIPTATSTTAGITKVLNVLGSNDVGSALSAAQGKVLNDNMNNFLNKFSSSLIANNGSFSIPLGNGTTIIVKYGSTSVNGDSNATVNFTTAFPSLCLNAQATLNSVSFDPLADAGCGVTWTRTGLTLRNGTANTLNISWLAIGY
Physico‐chemical
properties
protein length:276 AA
molecular weight: 28969,82610 Da
isoelectric point:4,71044
aromaticity:0,08333
hydropathy:-0,11884

Domains

Domains [InterPro]
DC_0979
STR
40–276
DC_0979
IPR054500
STR
148–180
IPR054500 G3DSA:2.60.40.3940
IPR054075
RBD
201–276
IPR054075
XVC01760.1
1 276
Architecture
STR
STR 40-276
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AB_NC1
[NCBI] 		3433628 Viruses >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVC01760.1 [NCBI]
Genbank nucleotide accession
PV693690.1 [NCBI]
CDS location
range 24915 -> 25745
strand -
CDS
GTGGCTAATCCTATATTTATCCCGATAGCATTCGCTGCTAATGGGGTTAAGAACCCTATTCAAAAGGTTCGGCAAGTCGGTCAAGATCCAGAGGATTTTACATGGGATGAAGGTTCGCCCTTAATTACCATGACAAAAATCGAAGATGGTGGCAAGGCGCCAAAAGGACAAGATTTTAACGGGGTGCTTAATGCCCTGTCTGAGCATGTCATCTATGGTCAAAATGGCAACCGTTATACGTGGTCACAAGATGTCATAGATGAATTTGGTGGCTATGCGTTAGGCGCAATCGTTCAATCCGATGATACCACAAAAGAATTTAGAAGCCTTGTAGCTAACAACACGGTAAACCCAAATAATGGGCTTGGTGGAGCTTGGGAAGTTTATAGCGGGCAAGGAAGTATCCCAACCGCAACAAGCACAACTGCAGGCATTACAAAGGTTTTAAATGTCTTAGGTAGTAATGATGTTGGATCTGCTTTAAGTGCTGCGCAGGGCAAAGTATTAAATGACAACATGAATAACTTTTTAAATAAGTTTTCATCAAGTCTGATTGCTAATAATGGTAGCTTTTCCATTCCACTAGGTAATGGAACTACAATCATTGTTAAATATGGCTCTACTTCTGTTAACGGTGACTCAAACGCTACTGTAAATTTTACAACCGCATTCCCAAGCTTATGCTTAAATGCTCAAGCTACATTAAATAGCGTGTCATTTGATCCATTGGCTGATGCTGGTTGTGGTGTAACTTGGACAAGAACTGGCTTAACTTTGCGAAACGGTACAGCTAACACATTAAATATTTCATGGCTTGCGATAGGATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cd27d7cd8bf4025040b69af697d82da01b6fb90f4ff0a2bc8c355b7f32861243
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9243
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genomic DNA sequence of Acinetobacter phage AB_NC1 Wang,Y., Wang,S. and Zhang,Z. 2016-02-08 — GenBank