Protein

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Genbank accession
CAL9972526.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPNRLKREGDYLLIFRHDSSGGAVFGSDAEARSTGTPDSDKFSALNALEHFRRPDGNFQFKLIYPEHTDLFNIWKQQNNFAAFDVGNYIRNGTFAGGLGVVEHNYTTGSWSTIEKENPGSSTYVLEHQPGAAQQYRMDIPQSRLKPNTTYTLTAWVGFEDTADRNKGIFHARWYDGSSNPIASSSLESGDVYLANGNSYVMDGITWERRYYRFTTPSSLADTTMFWYLGYSSASGGSLAGKRYFTNIQVLDKPLIYNYMGDYTATAGGVVGYEAIDINATGNNWGGLEYATRSETLADGSVGVSDWWFSIGCQSLYATDDYPGPNSNKVQVVELWVYAPLGAAVKQGELYASHFSESSSNQNVIYVNGVATDHIGGNQQRRGLPICYLNDNSMITGSATTRSDGKMFIIRWDSNLTHLTTHDFDMTTSTGRTNFAQELTNIAGNQELVAIVSAGNVISDANVDSTMVGFGAIEWKGTDFYSKYDYGYAAIVRADMGFVSERSQFNHPLEEESHTNCVFNTIDDLGDVGFGLPLLEDINTDGTSADIDITDVMEDQYVLLTCLGKRSYADAAAGTSRWCTIYWKNGSTVISQNAIRIESTTLTKYQLYAKRPAGVDGMHIWSSGCSEGFRSIYEATYEIPATDRIATSRNGISCNHISITPLSGTPWEPDSWYRMTTSNSNLLAGLPISQDEPTSVYWGDKTLTSNNEKCYVDKTNDAGSTTAIIPFPGKGVPYHVSWWVNYKQTPTAKNLFFQLRGRDSGGSYVNTIVDAVNGATGSTYPRLQYVDGTQLSENLDKWILLSGWILPNTWSQTQCRSFAAQRSYFFGTVDNIGDFDGFSNGIGIHNSTSETTYSGFFQVPDDVTEIQLRLDDRDNAGGTTEYCTALPCISQVKVAAADIDRAYVEEMQEFWEWRYRNHDNEDTGTYGTLGLTMKPNDEIEFYIRGDGNPDASRWQYLIDGNSPRCHVALTTTDSWSLSSQWDLWVDGIKTVNGSAFNPLDGFMHHVRLVNKSSSDLLIETIGCRYNFVELNTMSMWGMKGTFDGSPRSWEMNDGPDATFFQDRYNKTNITLVNPTNKNWYRTEVLV
Physico‐chemical
properties
protein length:1085 AA
molecular weight: 120797,80130 Da
isoelectric point:4,79110
aromaticity:0,12258
hydropathy:-0,44811

Domains

Domains [InterPro]
DC_0580
ATT
1–87
DC_0580 DC_0004
G3DSA:2.60.120.260
STR
85–249
G3DSA:2.60.120.260
CAL9972526.1
1 1085
Architecture
ATT
STR
STR
ATT 1-87 | STR 88-249 | STR 337-710 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAL9972526.1
1 1085
Domain Start End Length (AA) Confidence
N-terminal 1 874 874 0,0023
Central domain 875 1073 200 0,6037
C-terminal 1074 1085 11 0,8302
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-874
Central
875-1073
C-terminal
1074-1085

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D479
[NCBI] 		3105242 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAL9972526.1 [NCBI]
Genbank nucleotide accession
OZ195776 [NCBI]
CDS location
range 95558 -> 98815
strand +
CDS
ATGCCAAATCGATTAAAACGAGAAGGCGACTATCTACTAATCTTCCGCCACGATTCAAGTGGCGGAGCTGTATTTGGTAGTGACGCCGAAGCAAGAAGTACAGGTACGCCAGATTCTGATAAGTTCAGCGCATTAAATGCGCTTGAACATTTTCGTAGACCAGATGGCAACTTTCAATTCAAGTTAATATATCCAGAACATACGGACTTGTTCAATATATGGAAGCAGCAAAATAACTTTGCTGCATTCGATGTTGGCAATTATATTCGAAACGGCACGTTCGCGGGTGGACTTGGTGTGGTTGAGCACAACTACACCACAGGTTCGTGGAGTACTATCGAGAAGGAAAATCCAGGATCTTCGACGTACGTATTAGAACACCAACCAGGTGCGGCTCAGCAATATCGAATGGATATTCCTCAGAGTCGTTTAAAGCCAAATACAACCTACACACTAACAGCATGGGTTGGTTTTGAAGATACTGCAGACCGCAACAAGGGCATTTTCCATGCTCGTTGGTATGATGGCAGTAGTAATCCGATTGCTAGTAGCTCACTTGAAAGTGGTGATGTTTATTTGGCAAACGGAAACTCGTATGTAATGGACGGAATTACTTGGGAACGTAGATATTACCGATTTACAACACCAAGTTCGTTGGCTGATACAACCATGTTCTGGTATCTGGGTTATTCATCAGCATCTGGTGGCAGTCTAGCAGGTAAACGATATTTCACCAACATTCAGGTGTTGGACAAACCGTTGATCTACAATTACATGGGCGATTACACCGCAACTGCTGGTGGGGTTGTTGGATATGAAGCAATCGATATAAATGCAACAGGCAATAACTGGGGCGGATTGGAATATGCAACTAGATCGGAGACATTGGCGGATGGTTCGGTTGGAGTTAGCGATTGGTGGTTTTCGATCGGCTGTCAATCTCTATATGCCACTGACGATTATCCAGGTCCAAACTCGAATAAAGTCCAAGTTGTAGAGCTTTGGGTTTACGCACCATTAGGTGCTGCCGTAAAGCAAGGTGAATTGTACGCATCTCACTTTTCTGAATCCAGTAGTAACCAGAATGTCATTTACGTGAATGGCGTTGCGACTGATCATATTGGTGGAAACCAACAACGACGTGGTCTTCCAATATGTTATCTAAACGACAACAGCATGATTACAGGATCTGCGACCACTCGTAGTGATGGTAAAATGTTCATCATTCGTTGGGATAGCAATTTAACGCACTTGACTACTCACGATTTCGATATGACCACTTCAACCGGACGAACCAATTTCGCTCAGGAATTGACAAACATCGCCGGTAACCAAGAGCTAGTCGCTATTGTATCTGCTGGTAATGTAATCTCGGATGCAAACGTCGATTCGACCATGGTTGGTTTTGGTGCAATTGAGTGGAAAGGTACGGACTTTTATTCAAAATACGATTATGGATATGCAGCAATCGTACGAGCGGATATGGGATTCGTTTCAGAACGTAGTCAATTTAACCATCCACTAGAAGAAGAAAGTCATACAAATTGCGTATTCAATACGATTGACGATCTAGGTGATGTTGGTTTCGGTCTTCCGTTGCTTGAGGACATTAACACAGACGGAACTTCCGCGGATATCGATATTACAGATGTTATGGAAGATCAGTATGTGCTGCTAACGTGTTTGGGTAAACGTTCGTACGCAGATGCGGCGGCTGGTACAAGTCGTTGGTGTACGATTTATTGGAAAAACGGATCAACTGTAATTTCACAGAACGCGATTCGTATAGAATCGACAACGTTAACCAAATACCAATTGTACGCAAAGCGACCTGCTGGCGTCGATGGCATGCACATTTGGTCTAGTGGATGTTCAGAAGGATTCAGATCAATTTACGAAGCTACGTACGAAATTCCAGCAACTGACAGAATAGCAACATCTCGAAATGGCATTTCTTGTAACCATATTTCGATTACTCCATTATCTGGAACTCCTTGGGAACCGGATTCGTGGTACCGAATGACTACAAGCAATAGTAATTTACTAGCCGGTTTGCCAATATCGCAAGATGAACCAACGTCTGTTTATTGGGGTGATAAAACTCTAACAAGCAACAACGAAAAGTGCTACGTTGATAAAACAAACGATGCTGGATCAACAACAGCAATTATTCCGTTTCCGGGTAAGGGAGTTCCTTATCATGTGAGTTGGTGGGTGAACTATAAACAAACTCCAACCGCAAAGAATTTATTCTTCCAATTGCGTGGACGGGATAGTGGTGGTAGCTACGTTAATACGATCGTAGATGCAGTTAATGGAGCGACTGGTTCAACGTACCCAAGATTGCAATACGTCGACGGTACACAGTTGTCAGAAAATCTGGACAAGTGGATTTTGCTGTCTGGTTGGATTTTGCCTAATACTTGGTCACAAACCCAATGTAGATCGTTTGCCGCTCAACGAAGTTATTTCTTCGGAACAGTGGACAACATTGGTGATTTTGATGGTTTTTCCAATGGTATTGGTATCCACAACTCTACGTCTGAAACGACGTATTCTGGATTCTTCCAAGTACCAGATGACGTCACCGAAATTCAATTACGATTGGATGACCGTGATAATGCTGGTGGAACTACTGAATATTGCACGGCGCTACCTTGTATTTCACAAGTTAAAGTAGCTGCGGCGGACATTGACAGAGCTTACGTTGAAGAAATGCAGGAATTCTGGGAATGGCGCTACAGAAATCACGACAACGAAGATACCGGTACGTACGGAACATTGGGGTTAACAATGAAGCCTAATGACGAAATCGAGTTTTATATACGTGGCGACGGAAATCCAGACGCAAGTCGTTGGCAGTATCTAATTGATGGCAATTCACCTAGATGTCATGTAGCATTAACAACTACCGATTCTTGGTCATTGTCAAGTCAATGGGACTTGTGGGTTGATGGTATCAAGACGGTCAATGGTAGTGCGTTCAATCCACTAGATGGATTTATGCATCACGTTCGATTGGTCAACAAAAGCAGTTCAGATTTGTTGATAGAAACTATTGGCTGTCGATACAACTTCGTTGAGCTCAATACAATGTCGATGTGGGGCATGAAAGGTACATTTGATGGATCACCTCGTAGTTGGGAAATGAATGATGGACCAGATGCAACATTCTTTCAAGATCGTTACAACAAGACGAATATCACGCTCGTGAATCCAACAAATAAAAACTGGTATCGAACAGAAGTTCTAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c16ccbdfcf26ef24a5b30592ae69d3ea131fcde3696ab5471ff1dd1828fd201f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2810
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50