Protein

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Genbank accession
YP_009099787.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MPIWTKVAGTWKKVLDPEIKKAGAWTPVKVVSVKVGGVWQQVFAIEIVAFVAANATNVSLQSLFASGDWSNPLLKKRVVVNPGVIVGSTNPAVSALRTGTGWAGALQLDNYGEIQGAGGVPNSGAGGHAILCEAAGLTIKNFGAIRGGGGAGGKGGNGGAGVYYTTVTEGPQYNYPSGSPRYWWQTSPGSSDSVWWGGSNYVFGDINSPYTVGGITWTRGTQRDGSTSGGFTTNYFEVYRSYQQSHATSGGTGGNGGRGKGYGQTNAAGSSGSAGGTNAGTGGTGGTGGDWASGGATGATGNSGNNGGGSGGTAGGAAGKAISGSNTLINTGVVNGATS
Physico‐chemical
properties
protein length:339 AA
molecular weight: 33437,14190 Da
isoelectric point:9,51916
aromaticity:0,09145
hydropathy:-0,23127

Domains

Domains [InterPro]
DC_1762
ATT
1–180
DC_1762 DC_0422
IPR007932
RBD
48–184
IPR007932
YP_009099787.1
1 339
Architecture
ATT
RBD
ATT 1-180 | RBD 181-339
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage vB_RleM_P10VF
[NCBI] 		1527770 Uroviricota > Caudoviricetes > Pootjesviridae > Innesvirus P10VF >
Host Rhizobium leguminosarum
[NCBI] 		384 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009099787.1 [NCBI]
Genbank nucleotide accession
NC_025429 [NCBI]
CDS location
range 22239 -> 23258
strand -
CDS
ATGCCGATTTGGACAAAAGTCGCCGGAACTTGGAAGAAAGTTCTCGATCCTGAAATCAAGAAGGCCGGAGCATGGACTCCTGTCAAAGTGGTTTCCGTAAAGGTTGGAGGCGTCTGGCAACAGGTCTTCGCTATCGAGATCGTGGCATTCGTAGCTGCGAACGCGACTAACGTTTCTCTGCAGTCACTGTTCGCATCAGGAGACTGGTCGAACCCTCTCCTCAAGAAGAGAGTCGTTGTCAATCCAGGTGTGATCGTCGGCAGCACGAACCCCGCTGTCTCTGCTCTTCGTACTGGTACAGGTTGGGCTGGTGCTCTTCAGCTCGACAACTACGGAGAGATCCAGGGTGCTGGCGGTGTTCCGAACTCTGGTGCTGGTGGACACGCTATTCTTTGCGAAGCTGCTGGACTCACTATCAAGAACTTCGGTGCTATTCGAGGCGGAGGTGGTGCTGGCGGCAAAGGTGGTAACGGCGGTGCTGGTGTCTACTACACGACTGTTACAGAAGGTCCGCAATACAACTATCCGAGCGGCAGCCCTCGTTATTGGTGGCAGACATCTCCTGGCTCTAGTGATAGTGTCTGGTGGGGAGGTAGCAATTACGTCTTCGGCGATATCAACAGTCCGTACACGGTCGGTGGAATTACGTGGACACGCGGTACACAACGAGATGGCTCTACGAGCGGCGGCTTCACCACGAATTACTTCGAAGTGTATCGCTCCTACCAGCAATCTCACGCTACCTCTGGCGGTACTGGTGGTAACGGTGGTCGAGGCAAGGGTTACGGTCAGACGAACGCTGCTGGATCTTCTGGATCAGCCGGTGGCACGAACGCTGGTACTGGTGGTACAGGCGGCACTGGTGGAGATTGGGCTTCCGGAGGTGCAACAGGTGCAACAGGCAATTCTGGCAACAACGGCGGTGGTTCTGGCGGTACTGCTGGTGGAGCAGCCGGTAAAGCTATCTCCGGCTCTAACACTCTGATCAATACGGGTGTAGTCAACGGAGCGACTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2ce5be5b9cdadcbaa71477e23b73bd6cdaa7d2f1af55da9401d935a8bfa4b053
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9032
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Rhizobium leguminosarum phages from western Canadian soils and complete genome sequences of rhizobiophages vB_RleS_L338C and vB_RleM_P10VF Restrepo-Cordoba,M., Halmillawewa,A.P., Perry,B., Hynes,M.F. and Yost,C.K. 2015-09-16 — GenBank