Protein

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Genbank accession
WYM31311.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSTKNLKGGMSQQPDILRFPEQGALQLNGWSSETEGLQKRPPMLFNRTVGEAHSMGTAPFIHLINRDEFEQYYVVFTGTDVRVFNMEGGEYQVRGDRSYVTTNNPRNDLRMVTVADYTFIVNRNIVVEEHPDMTNGGTFNENRDFLINVRGGQYGRTLQVGFNGLVGATYKIPDGDQKEHVQNTDAQWLAEELARQLRAHIPAWTFNVGQGYIHCIANPGDSAWGIWTKDGYADQLINPVTHYAQSFAKLPPNAPDGYMVKIVGDTSKTADQYYVRYDNGRKVWVETVGWNQKFQMVDSSMPWTLIRASDGNFDLKPASWGKRTAGDLDTSPWPSFVGSKLNDVFFFRNRLGFLSGENVVLSRTAKYFNFFAPSVSNFSDDDPIDVAVSHNRVSTLKYAVPFTEELLLWSDEAQFVLSASGILSGKSVELNLTTQFDVQDKARPFGIGRNIYFASPRATHTSINRYYAVQDVSSVKNAEDITAHVPSLIPNGVFSISGSSAENFAAVLTSGAKGRVYIYKFLYLGEELRQQSWSYWDFGDNVEVLAANTIGSRMYLLLRNQFHAWSCEINFTKESIDFENEPYRIHLDMKRQYVIPANAFNEDTFQTALNIYDIYGSNFQKGDITIVELDGKITTVSPPPGGWNTGHWFYLDGNLAGKLVFCGFNFEFRYEFSKFLIKKVADDGSTATEDIGRLQLRRAWINYEDSGAFTIRVENLSRVFEYDMAGGRLGSDNLRVGRLNLGTGQYRFPVTGNAKYNKVSLLSDNTTPLNVIGCGWEGNYIRRSNGI
Physico‐chemical
properties
protein length:792 AA
molecular weight: 89203,77530 Da
isoelectric point:5,74258
aromaticity:0,12753
hydropathy:-0,37235

Domains

Domains [InterPro]
IPR058003
TTP
1–792
IPR058003
WYM31311.1
1 792
Architecture
TTP
TTP 1-792
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYM31311.1
1 792
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9942
Central domain 138 346 210 0,3469
C-terminal 347 792 445 0,1851
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-346
C-terminal
347-792

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage Citrof5
[NCBI] 		3136606 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYM31311.1 [NCBI]
Genbank nucleotide accession
PP554395 [NCBI]
CDS location
range 13119 -> 15497
strand -
CDS
ATGGCACTCATTAGTCAATCAACAAAGAACCTTAAGGGCGGTATGTCCCAACAGCCAGATATCTTACGGTTCCCTGAGCAGGGCGCGTTGCAGCTTAATGGCTGGTCCTCAGAGACCGAGGGCCTCCAGAAGCGTCCACCTATGTTATTCAATAGGACAGTCGGTGAGGCCCACTCGATGGGTACAGCACCGTTTATCCACCTGATTAATCGTGATGAGTTCGAGCAGTATTACGTGGTGTTCACTGGGACCGATGTTCGTGTCTTCAATATGGAAGGTGGAGAGTATCAAGTCCGTGGAGACCGTAGCTACGTCACTACGAACAACCCAAGGAATGACCTCAGGATGGTCACTGTGGCTGATTACACGTTCATCGTGAACCGCAACATTGTCGTGGAGGAACACCCAGACATGACCAACGGTGGCACCTTCAACGAGAACCGTGACTTCCTGATTAACGTTCGTGGTGGTCAGTATGGTAGAACGCTTCAGGTTGGATTTAATGGTTTAGTAGGTGCTACCTATAAGATTCCTGATGGAGACCAGAAGGAGCACGTTCAGAATACGGATGCTCAGTGGTTAGCCGAGGAGTTGGCCCGTCAGCTCCGAGCTCACATACCAGCGTGGACCTTCAACGTGGGCCAAGGTTACATTCACTGTATTGCTAACCCCGGCGACTCCGCGTGGGGTATCTGGACTAAGGATGGTTATGCTGACCAGCTTATAAACCCTGTGACCCACTACGCTCAGTCATTCGCTAAGTTGCCTCCTAATGCGCCTGATGGCTACATGGTGAAGATTGTGGGTGATACCTCCAAGACTGCCGACCAGTATTACGTTAGATACGACAACGGGAGAAAAGTATGGGTAGAGACGGTTGGTTGGAACCAGAAGTTCCAGATGGTTGACTCGTCTATGCCTTGGACTTTAATCCGAGCGTCAGATGGTAACTTTGACCTGAAGCCTGCCTCATGGGGCAAACGTACTGCTGGTGATTTGGATACCTCTCCGTGGCCTTCCTTCGTTGGCTCCAAGTTGAACGATGTGTTCTTCTTCAGGAACCGCCTAGGATTCCTCTCAGGGGAGAACGTGGTGTTGTCGCGTACAGCCAAGTATTTCAACTTCTTCGCCCCTAGCGTGTCGAACTTCAGCGACGATGACCCTATCGACGTGGCAGTGAGTCACAACCGAGTGTCCACCTTGAAGTATGCTGTACCGTTCACAGAGGAACTCTTACTGTGGTCCGATGAGGCTCAGTTCGTTCTGTCAGCTTCCGGCATCCTCTCAGGGAAGTCCGTTGAGTTGAATCTTACGACTCAGTTCGATGTACAGGACAAGGCGCGTCCATTCGGTATAGGTCGTAATATCTACTTCGCGTCCCCTCGTGCCACCCACACGTCCATCAACCGTTACTATGCGGTACAGGATGTGTCCAGCGTGAAGAACGCAGAGGACATTACGGCTCACGTGCCAAGTCTTATCCCTAATGGTGTGTTCAGTATCTCAGGGAGTTCCGCTGAGAACTTTGCTGCTGTTCTAACCAGTGGGGCCAAGGGTCGAGTGTACATCTACAAGTTCCTGTACTTGGGTGAAGAGTTGAGGCAACAGTCGTGGTCCTATTGGGACTTCGGGGATAACGTTGAGGTCCTAGCGGCTAACACGATTGGCTCCCGGATGTACTTGCTATTACGTAACCAGTTCCACGCGTGGTCCTGTGAGATTAACTTCACGAAGGAGTCTATTGACTTCGAGAATGAACCTTACCGAATCCACTTGGACATGAAGCGTCAGTACGTAATCCCAGCTAATGCGTTCAACGAGGACACCTTCCAGACTGCCCTGAATATCTATGATATATATGGGTCGAACTTCCAGAAGGGAGACATCACAATCGTTGAGTTAGACGGTAAGATTACCACTGTGTCCCCACCTCCGGGTGGCTGGAATACTGGTCACTGGTTCTACCTTGACGGGAACCTAGCAGGTAAACTTGTGTTCTGTGGGTTCAACTTTGAGTTCCGCTATGAGTTCTCTAAGTTCCTCATCAAGAAGGTTGCTGATGATGGTTCAACCGCTACGGAAGACATTGGACGCTTACAGCTTCGACGAGCATGGATTAACTATGAGGACTCTGGGGCCTTCACGATTCGCGTGGAGAACCTAAGCCGGGTCTTCGAGTATGACATGGCTGGTGGGCGTTTAGGCTCCGATAACCTCCGTGTGGGACGTCTGAACCTCGGTACTGGACAGTATCGTTTCCCGGTAACTGGCAACGCTAAGTACAACAAAGTGTCCTTACTCAGTGATAACACAACGCCTCTAAATGTGATTGGCTGTGGCTGGGAAGGTAACTACATTCGCCGCTCTAACGGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d289da5b2c25c385ef878eb721516b63afd844d58fab336ec91090db5e657f24
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3106
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50