Protein

View in Explore
Genbank accession
AUR87968.1 [GenBank]
Protein name
tail fiber protein/ lysozyme
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MAQTLDSFLIGIGLDFQTDDVKKVNSGLDSVKRTALQAASAVAGAFGTKAVTADVANRTRGYTLLAEQIGSTANAVASLDSAYTRAGGGAGEIIGQLEQLKELQAGLQVGNVEWISRAAMAGIDTGGIINEQDPTEIFRNVIGQLEGMSTNQRINAINALGLNPTAINLAEDGLAELDAQIQKSLDRRSISESLQKDSEIFATQWSDMWENIYGITDRAGTQIIPAVNEITGSINDFFDANRDNINSGADEFFGKIADNLDSLAIAGVAVTASGVGTTLAGMAKAVPIIGGGAKTFAAFAKSLGAIGVAAAGINLVMNEGGKGGALSAGSIFGENSFTDFLDTPISELFNSSPSASPTVITPSQTAPLSAPVVSAQSYTSDRGKTFDPYNQQSQATRPRTLQPINIQIGNQAIKQIVVDIIDEEEKQAVKDLRSPLTR
Physico‐chemical
properties
protein length:438 AA
molecular weight: 45732,55810 Da
isoelectric point:4,51327
aromaticity:0,05479
hydropathy:-0,06005

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.106.O._10N.286.51.F7
[NCBI] 		1881248 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR87968.1 [NCBI]
Genbank nucleotide accession
MG592478.1 [NCBI]
CDS location
range 24868 -> 26184
strand +
CDS
ATGGCGCAAACTCTCGATAGCTTCTTGATAGGGATCGGACTCGACTTTCAAACGGATGACGTAAAAAAGGTCAATTCCGGTTTAGATTCGGTTAAACGAACAGCTCTACAGGCTGCGTCTGCGGTAGCTGGTGCGTTTGGTACAAAAGCTGTAACTGCTGACGTTGCCAATAGAACACGCGGATACACATTACTAGCCGAGCAAATAGGCTCGACTGCTAATGCTGTAGCTTCTTTAGATTCGGCGTACACTCGCGCTGGCGGTGGCGCTGGTGAGATTATCGGGCAACTTGAGCAACTAAAAGAATTGCAAGCAGGCTTGCAGGTTGGCAACGTTGAATGGATTTCACGCGCGGCTATGGCGGGCATTGATACTGGCGGAATAATCAACGAGCAAGATCCAACTGAGATCTTCCGTAATGTGATCGGACAGCTTGAAGGTATGTCTACCAACCAAAGAATCAATGCCATCAATGCGCTTGGTTTAAATCCGACTGCAATCAACCTTGCTGAAGATGGGCTTGCGGAATTAGATGCGCAAATACAAAAGTCACTCGACCGCCGATCTATTTCTGAGTCACTGCAAAAGGATAGTGAAATATTTGCAACGCAATGGTCTGACATGTGGGAAAATATTTACGGCATTACAGATCGCGCAGGTACGCAGATCATCCCCGCCGTTAATGAAATCACTGGAAGTATTAATGATTTCTTTGATGCGAATCGCGACAATATAAACAGTGGTGCGGATGAGTTTTTTGGGAAGATTGCCGACAACTTAGATTCATTGGCTATTGCAGGTGTTGCGGTTACGGCTTCTGGCGTTGGCACTACGTTAGCAGGAATGGCAAAGGCTGTGCCTATTATTGGTGGTGGCGCTAAAACATTCGCAGCATTCGCAAAGTCATTAGGTGCAATTGGCGTTGCTGCTGCGGGTATCAATCTCGTTATGAATGAGGGTGGCAAAGGTGGCGCGTTATCTGCTGGTTCTATCTTCGGTGAAAACTCATTTACTGACTTTTTAGATACGCCGATCTCTGAGTTGTTTAACTCTAGCCCGTCAGCAAGCCCGACAGTTATCACGCCGTCACAAACTGCGCCCTTATCTGCGCCAGTAGTTAGTGCTCAAAGCTACACAAGCGACCGAGGGAAAACGTTTGACCCATACAACCAACAAAGCCAGGCAACACGACCACGAACGCTACAGCCAATAAATATCCAGATCGGCAACCAAGCAATTAAACAAATTGTTGTGGACATTATCGACGAGGAAGAAAAGCAAGCGGTTAAGGATTTGCGCAGTCCGTTGACTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
115dc8d737783f3b5aacc20edf4301b88904c41b98db042a23942815543af334
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7130
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank