Protein

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Genbank accession
ASN73053.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTIQSQTTRVDYTGNGATTNFPVPFYWLQDADLLVIRTDNAYTPPAVATLALTTDYVVAGSGNQSGGSITTTVAPTATQKLSILRNVPFTQLTHYVPNDPFPAASHEQALDKLTMETQQLNEGLSRSLTLPPNVTAVSTNLPAPVASNLIGWNPTANALQNVDLTTIATSVTYGNAKGDLFSGNGATVNFNLSANPGGVNNLDVSIGGVAQRPGIDYNWTAGTTLTFTTAPPSGTNNILVRYTQALPIGTAAAGNVAFDNTTLDQQFLRRVNRVVDSIAALRGLSKTTYTRAFVTGYYAAGDGGGGAYWYDPTDTTSTDNGGTIIVAADGGRWKLIITTSFVSAKQFGAKIDGVTDDSTVINNAKAPLDALGKRLYFPAGICKIGTAIMPPLAGVFGDSPQSSVILCNGVSAFNFPSTFGLGRPACLIEKLGIKSYNNTCDGLFAFNAPGVASGAAVVYNSGLTVRDVEIGTGGRFGGAFSLKDFFRVNIENVGCTDVSQVINLAGSVVQCTFRNITANGDNAPTILQRTGLSTTAATYSSGLLTPEHISCWDCSFIRFNIGVNHQAGLMIDFNQMDMETFQYGFYLRAACNINGGIINPAPNSAGTAAWIGVFKDVQDFEITNGAIIDGLDVNALNVPGTPGSSYGMVIGNGVNKCVGTTIKNCRFRGSASSFLSAISAPLMGGEIILENNQVSGTVATGTTFSVTGASYARVVGNRCATGGTVNGSMSITDSGAGTVGTVLGNEFATITNTVNAYSGAWAPGTIANLVAASTTVAVPGAIAGDRVVAGLSSLIGSGNCIISGYVSSSGNVTVMLLNASGGSQTIPSGTLSVSVIKP
Physico‐chemical
properties
protein length:838 AA
molecular weight: 86433,05250 Da
isoelectric point:5,27894
aromaticity:0,07876
hydropathy:0,14010

Domains

Domains [InterPro]
DC_1548
STR
1–120
DC_1548 DC_0706
IPR012334
STR
338–835
IPR012334
IPR011050
STR
339–522
IPR011050
ASN73053.1
1 838
Architecture
STR
STR
STR 1-120 | STR 232-838
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ASN73053.1
1 838
Domain Start End Length (AA) Confidence
N-terminal 1 356 356 0,9955
Central domain 357 750 395 0,9960
C-terminal 751 838 87 0,9938
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-356
Central
357-750
C-terminal
751-838

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage DU_RP_II
[NCBI] 		2022331 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASN73053.1 [NCBI]
Genbank nucleotide accession
MF150911.1 [NCBI]
CDS location
range 19634 -> 22150
strand +
CDS
ATGACCATTCAGAGCCAGACTACGCGGGTCGATTACACCGGCAATGGCGCCACGACGAACTTCCCGGTGCCGTTCTACTGGTTGCAAGACGCCGACCTGCTGGTCATCCGTACCGACAACGCGTACACGCCGCCCGCGGTGGCCACGCTGGCGCTCACCACGGACTACGTGGTGGCGGGCTCGGGAAACCAGTCGGGCGGCTCGATCACGACGACAGTGGCACCAACCGCCACGCAGAAGCTGTCGATCCTGCGCAACGTGCCGTTCACGCAGCTGACGCACTACGTCCCCAACGATCCGTTCCCGGCGGCCTCGCACGAGCAAGCGCTGGACAAGCTGACGATGGAGACGCAGCAACTGAACGAAGGTTTGTCGCGCTCGCTGACGCTGCCGCCGAACGTTACCGCGGTTAGCACGAACCTACCGGCTCCGGTTGCCAGCAACCTGATCGGTTGGAACCCAACCGCCAACGCCTTGCAAAATGTGGACCTCACCACAATCGCCACGTCGGTGACGTATGGCAACGCCAAAGGCGATTTGTTCAGCGGCAACGGCGCCACGGTCAATTTCAACTTGTCGGCAAACCCGGGGGGCGTCAACAATCTTGACGTATCGATCGGAGGCGTGGCGCAGCGCCCCGGCATCGACTACAACTGGACGGCCGGCACCACGCTTACGTTCACGACGGCGCCCCCGTCCGGTACGAACAACATTTTGGTGCGTTACACGCAAGCTCTGCCTATCGGCACAGCAGCCGCAGGAAACGTGGCGTTTGACAACACCACGTTGGATCAGCAGTTCTTGCGCAGAGTCAACCGAGTTGTCGATAGTATCGCCGCTTTACGGGGGTTGTCGAAAACAACGTACACGCGGGCATTCGTCACCGGCTATTATGCGGCGGGCGATGGCGGTGGTGGCGCGTACTGGTACGACCCGACCGACACGACCAGCACAGACAACGGCGGCACGATCATCGTTGCCGCCGATGGGGGGCGCTGGAAATTGATCATCACGACGAGCTTCGTGTCGGCCAAACAATTCGGCGCCAAGATTGACGGCGTGACGGACGACAGCACAGTCATCAACAATGCCAAGGCGCCGCTAGACGCGCTCGGTAAGCGGCTCTATTTCCCAGCCGGCATCTGCAAAATTGGCACGGCGATCATGCCGCCGCTTGCCGGTGTATTCGGCGACAGTCCGCAATCCTCCGTCATTCTCTGCAATGGTGTTTCAGCGTTTAATTTCCCTAGCACGTTCGGCCTTGGGCGGCCGGCCTGTTTGATCGAAAAGCTCGGTATCAAGTCGTACAACAATACGTGCGACGGTCTGTTCGCATTCAATGCTCCAGGCGTCGCGTCAGGCGCAGCTGTTGTCTACAACAGCGGCCTGACAGTGCGCGATGTGGAGATCGGCACAGGCGGCCGTTTTGGTGGCGCATTCAGTCTGAAAGACTTCTTCCGCGTTAATATTGAGAATGTAGGCTGCACCGATGTAAGCCAGGTGATTAACCTGGCGGGCTCTGTGGTTCAATGCACTTTCCGCAATATTACGGCGAATGGTGACAATGCCCCTACGATTCTACAGCGCACTGGTCTCAGCACAACAGCAGCAACCTATTCGAGCGGATTGCTAACGCCTGAGCATATCAGTTGCTGGGACTGTAGTTTCATCCGATTCAATATCGGCGTTAACCACCAGGCCGGATTGATGATCGATTTCAACCAGATGGATATGGAGACGTTCCAATATGGGTTCTATCTGAGAGCGGCTTGCAATATCAATGGTGGTATTATCAATCCGGCGCCTAATTCTGCCGGAACCGCCGCATGGATCGGTGTTTTCAAAGATGTACAGGATTTCGAGATTACCAATGGCGCGATCATAGATGGGCTAGATGTGAACGCGCTGAATGTGCCTGGCACACCAGGATCGTCCTATGGCATGGTCATCGGTAACGGCGTTAATAAGTGTGTCGGCACCACTATCAAGAACTGCCGATTTCGCGGGTCCGCCTCGTCCTTCCTGAGTGCCATTAGCGCGCCGCTGATGGGCGGCGAAATCATCTTAGAGAACAACCAAGTCAGTGGCACTGTGGCCACCGGCACGACATTTTCTGTTACCGGCGCATCCTACGCTCGCGTGGTTGGAAACCGGTGCGCGACAGGTGGCACGGTCAATGGCTCTATGTCTATCACTGACAGCGGCGCAGGCACTGTCGGCACAGTCCTCGGCAATGAATTCGCCACGATCACCAATACGGTCAATGCGTACTCCGGCGCATGGGCACCGGGCACGATTGCAAACCTCGTGGCAGCAAGCACGACCGTCGCCGTTCCAGGCGCAATAGCTGGAGACAGGGTCGTCGCTGGCCTCTCCAGCCTCATCGGTAGCGGTAACTGCATCATCTCTGGATACGTCTCATCCAGTGGGAACGTGACTGTAATGCTCCTGAACGCCTCGGGTGGCTCGCAGACTATCCCTTCCGGAACGCTTAGTGTCTCGGTGATAAAGCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b3d0fdfe461a83633800a3f2b59031534c2d7c6ab08607e7d6db4a8b9bc479a8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8177
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of bacteriophage to control bacterial wilt disease in potato Park,T.-H. 2012-02-28 — GenBank