Protein

View in Explore
Genbank accession
WXB47700.1 [GenBank]
Protein name
bicyclomycin resistance protein
RBP type
TSP
Evidence DepoScope
Probability 0,93
Protein sequence
MYLPSLPAIAADLGASDAQVQRSISGFLVGFCVGMLFYGPLSDRFGRRPVLLAGIALYLFSSLACALADSAGQLVLLRVLQALGGGAASVLARAMVRDLYPLGEAARMLALMHMVTMLAPLAAPLLGGYLMLWAGWRALFVVLALFAGLCLLAVWRVAESHPPERRGGSLAQAFLAYGRLLGDRRALGYVLCMGLAFAGMFAYISAAPFVFIEHFGVRAERFGWFFGLNILGVMLATWCSARLVRRHGPRPLLRAGSLLACVSGLFLLGYAALGERGGLWALVPGLLCFVSVTGLLGANCIASLLALYPGQAGAASAVAVSGQFGLGCLASLAVGWLALPGVLPMALVMAVCGVGSLLALGLALHGGNR
Physico‐chemical
properties
protein length:369 AA
molecular weight: 38411,60020 Da
isoelectric point:9,60800
aromaticity:0,09756
hydropathy:0,97832

Domains

Domains [InterPro]
PTHR23502
Unmapped
1–337
PTHR23502
NF008314
Unmapped
1–360
NF008314
G3DSA:1.20.1720.10
STR
1–361
G3DSA:1.20.1720.10
IPR004812
Unmapped
1–359
IPR004812
IPR036259
STR
1–364
IPR036259
IPR011701
STR
1–329
IPR011701
cd17320
STR
1–354
cd17320
IPR020846
STR
1–367
IPR020846
G3DSA:1.20.1720.10:FF:000005
Unmapped
1–362
G3DSA:1.20.1720.10:FF:000005
WXB47700.1
1 369
Architecture
STR
STR 1-367 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WXB47700.1
1 369
Domain Start End Length (AA) Confidence
N-terminal 1 175 175 0,7468
Central domain 176 358 184 0,1188
C-terminal 359 369 10 0,9867
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-175
Central
176-358
C-terminal
359-369

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Ostro
[NCBI] 		3097007 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa 382
[NCBI] 		581174 Basidiomycota > Dacrymycetes > Dacrymycetales > Dacrymycetaceae > Dacrymyces >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WXB47700.1 [NCBI]
Genbank nucleotide accession
OR683408 [NCBI]
CDS location
range 44263 -> 45372
strand +
CDS
ATGTACCTGCCGAGCCTGCCGGCGATCGCCGCCGATCTCGGCGCCAGCGATGCCCAGGTGCAGCGGAGCATCAGCGGCTTCCTGGTCGGCTTCTGCGTCGGCATGCTGTTCTACGGCCCCTTGTCCGACCGTTTCGGCCGGCGCCCGGTGCTGCTGGCCGGTATCGCCTTGTACCTGTTCAGCAGCCTGGCCTGCGCGCTGGCCGACAGCGCGGGGCAACTGGTCCTGCTGAGGGTGCTCCAGGCCCTCGGCGGCGGCGCCGCGTCGGTGCTGGCGCGGGCCATGGTGCGCGACCTCTATCCGTTGGGCGAGGCCGCCCGGATGCTGGCATTGATGCACATGGTGACCATGCTGGCACCGCTGGCCGCGCCGCTGCTCGGCGGCTACCTGATGCTCTGGGCCGGCTGGCGCGCGTTGTTCGTGGTCCTGGCGCTGTTCGCCGGGCTCTGCCTGCTGGCGGTCTGGCGGGTCGCCGAAAGCCACCCGCCGGAGCGCCGCGGCGGCAGCCTGGCCCAGGCCTTTCTCGCCTATGGGCGGCTGCTCGGCGACCGTCGCGCGCTGGGCTACGTGCTGTGCATGGGGCTGGCGTTCGCCGGGATGTTCGCCTACATCAGCGCCGCGCCCTTCGTGTTCATCGAGCATTTCGGCGTGCGCGCGGAGCGCTTCGGCTGGTTCTTCGGCCTGAACATCCTCGGCGTGATGCTCGCCACCTGGTGCAGCGCGCGCCTGGTGCGCCGCCACGGTCCGCGGCCGCTGCTGCGGGCCGGCAGCCTGCTGGCCTGCGTGTCCGGGCTGTTCCTCCTCGGCTATGCGGCGCTCGGCGAGCGGGGCGGGTTGTGGGCGCTGGTGCCCGGCCTGCTGTGCTTCGTCAGCGTCACCGGCCTGCTCGGCGCCAACTGCATCGCCAGCCTGCTGGCGTTGTATCCCGGACAGGCCGGGGCGGCTTCGGCGGTGGCGGTGTCCGGGCAGTTCGGCCTCGGCTGCCTGGCCAGCCTGGCGGTCGGCTGGCTGGCGCTGCCCGGCGTGCTGCCGATGGCGCTGGTGATGGCCGTCTGCGGCGTCGGCAGCCTGCTCGCGCTGGGCTTGGCCCTGCACGGCGGAAACCGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
650e5491e05e34e8d842f8040fdafae38f5fd9aff00fa37293a4df32212083ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9502
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages of P. aeruginosa: insights into their role through their activity, abundance and persistence Kyrkou,I., Bartell,J.A., Lechuga,A., Lood,C., Lavigne,R., Molin,S. and Krogh Johansen,H. 2024-01-16 — GenBank