Protein

Genbank accession
CCI88744.1 [GenBank]
Protein name
phage tail fibers
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MELTDITRAFESGDFARPNLFEVEIPYLGQNFKFKCKAATLPSGTVDKIPVGYMNRKLNIAGDRTFDDWTVTIYNDDAHSTRDAIVAWQDLCHGQGNEISGANPADYKKTALVRQFHRNGQEITKEYTLTGIWPTIVAEVQMDWDSNNEVQIFETTFSLDWWQ
Physico‐chemical
properties
protein length:163 AA
molecular weight: 18674,59040 Da
isoelectric point:4,70680
aromaticity:0,12270
hydropathy:-0,49755

Domains

Domains [InterPro]
IPR010667
20–162
IPR010667
CCI88744.1
1 163
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage phiR1-RT
[NCBI] 		1206558 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Yersinia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCI88744.1 [NCBI]
Genbank nucleotide accession
HE956709.1 [NCBI]
CDS location
range 104334 -> 104825
strand +
CDS
ATGGAGCTTACAGATATCACAAGAGCATTTGAATCAGGTGACTTCGCACGTCCTAACCTATTTGAGGTAGAAATTCCTTATTTAGGCCAAAACTTCAAATTCAAGTGCAAAGCAGCTACATTGCCGTCAGGCACAGTAGATAAAATTCCAGTTGGGTACATGAACCGTAAATTAAATATTGCCGGTGACCGTACTTTTGATGATTGGACAGTAACAATTTACAACGACGACGCTCACTCAACTCGTGATGCTATCGTTGCTTGGCAAGATTTGTGCCATGGTCAAGGTAATGAAATTTCTGGCGCTAATCCAGCTGATTATAAAAAAACAGCTTTAGTACGTCAGTTCCATCGTAATGGACAAGAAATTACTAAAGAATATACACTAACAGGTATTTGGCCTACAATTGTAGCTGAAGTACAAATGGATTGGGATTCTAACAACGAAGTTCAAATCTTTGAGACTACCTTCTCCCTGGACTGGTGGCAGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
c8fd098d7104d8323747e8f0525644ef2147fd5c4df60510d9a2a5cf0f4b7e16
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7893
Evidence 0,7893
Download PDB

Literature

Title Authors Date PMID Source
Genomic characterization of five bacteriophages specific for Yersinia species Skurnik,M., Nawaz,A., Happonen,L., Butcher,S. and Mattinen,L. 2012 — GenBank