Protein

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Genbank accession
QCQ65468.1 [GenBank]
Protein name
L-shaped tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSTSSITAGELTAAVEASAVSAAAAKDSEIAAKESETNAKDSENLAAIYATSSETSATQSAASAAEAERQAGLSQKSAEASATSAEESKGFRNSAELAAQNAETSRRLAEQAKTAAQQAQTAAETAKTGAETAKAGAEAAATTAGEHAASAKQSELNAKESETNAAGSAVEAGDKAVDATTEANRAKAEADRAAQIVDSKLDKEDISGFIKVYKTKAEADADVANRVLGEKILVWNQTDSKYGWYKVAGTAEAPVLELVEIEQKLVSINNVHADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVSEAEWQAGATLYFSTGDGSTTFRLPDMMQGQAFRAPTKGEEDAGVVKDQIPYITVINGVSPNDTGEVTLGNVVTKNVWDGTSGEVLLRGAFGLGGSGIQLNEPDLVSFFKAMRAFGSGYYRNDTAIGGLPAYSAGFYSKTADTHSFICPQYSSGIVFIGTINDGQLDGENPAIHTNVLYGTANKPDLNNGTEGTLSVNKGGTGVSTYEGVRSSFNIQGVFCVTSEESGDFNSISSPNGKLNLLIANSKVWGVQDTEGNIAPLLVERGGTGATNISQARKNLGIGESDIPVFKGVNLTLTNGANSGLLYLTNKNTEGVQRTYSSIYNELQSELSKTTIRSSNDVTGKTAFLQFDENGKLYTSSVEATGNIKTGSLNLNYGHTFTINPGEQNTLQISNYVAGIDTWCGYTKYNWYNDYAIAGLVRGGSTHVSDYRIEVYSPGVDAYSFQFFPQGKLRGASFNGRCTQGGWEMDLDENAHTIPFNARSIGNNNGGWVPIVSGGYATPSGYRIRAAFGAISPGASGWGRGVIKLMGDNSYFRGFEFHPSGNLTTWANSPDNAWGTAFEFTKSPSSDRDLKKDIIYTDGKEAYDRVMQWLPTLFKYKGQTTQRYGFIAQDLMKVDPQYVKLVPGAPVFEDVIGINEDGEEYIDRRIETGVEDDTLALDSNVMLVDLGAAVIYMNSQMEQQRKELEELKALVATLVNR
Physico‐chemical
properties
protein length:1074 AA
molecular weight: 114590,17390 Da
isoelectric point:4,74642
aromaticity:0,08473
hydropathy:-0,35708

Domains

Domains [InterPro]
DC_0608
ATT
2–548
DC_0608 IPR030392 Coil
DC_0195
STR
409–1074
DC_0195
IPR030392
CHP
943–1061
IPR030392
QCQ65468.1
1 1074
Architecture
ATT
STR
ATT 2-548 | STR 549-1074
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCQ65468.1
1 1074
Domain Start End Length (AA) Confidence
N-terminal 1 580 580 0,9070
Central domain 581 779 200 0,3724
C-terminal 780 1074 294 0,8857
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-580
Central
581-779
C-terminal
780-1074

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Seabear
[NCBI] 		2565516 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCQ65468.1 [NCBI]
Genbank nucleotide accession
MK728824.1 [NCBI]
CDS location
range 84957 -> 88181
strand -
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAGTATCCTAAATATACAGTAGTTTTAGGTAATTCTACTAGTTCTATTACTGCTGGTGAATTAACTGCTGCTGTAGAAGCCTCTGCTGTTTCTGCTGCGGCAGCAAAAGATTCCGAAATTGCAGCAAAAGAATCTGAAACAAATGCTAAGGACTCGGAGAACCTAGCTGCAATTTATGCTACTTCTTCTGAAACATCTGCAACTCAATCTGCGGCATCTGCCGCGGAAGCTGAGAGACAAGCTGGTCTGTCACAAAAGAGTGCTGAAGCATCCGCTACATCGGCGGAAGAATCTAAAGGATTCAGGAATTCTGCTGAATTAGCTGCTCAAAATGCGGAGACCAGTCGTAGACTTGCCGAACAAGCTAAAACTGCGGCTCAACAAGCTCAGACAGCTGCAGAAACTGCTAAGACTGGTGCTGAAACAGCAAAAGCAGGTGCAGAAGCTGCTGCTACAACTGCTGGAGAACATGCTGCTTCCGCTAAACAATCAGAATTAAATGCTAAAGAATCAGAAACTAATGCGGCTGGTTCTGCTGTAGAAGCAGGAGATAAGGCTGTAGATGCTACTACTGAGGCAAATCGTGCTAAGGCTGAAGCCGATCGCGCAGCCCAGATTGTAGATAGCAAGCTGGATAAAGAAGATATATCTGGTTTCATCAAAGTTTATAAGACAAAAGCAGAAGCTGATGCAGATGTTGCAAATCGTGTTCTGGGTGAAAAGATTCTAGTCTGGAACCAAACTGATTCAAAATATGGTTGGTATAAGGTTGCTGGTACTGCTGAGGCTCCTGTCCTAGAATTAGTAGAAATTGAACAGAAACTCGTATCAATCAATAACGTTCATGCAGATGATGCTGGTAACGTACAGATCACTCTTCCAGGAGGTAACCCTTCTTTATGGTTAGGTGAAGTTACTTGGTTCCCTTACGATAAAGATTCGGGTGTTGGATACCCTGGTGTTCTGCCAGCTGATGGTCGTGAAGTACTTCGTGTTGACTATCCTGATACTTGGGAAGCCATCGAAGCTGGTCTAATTCCTTCTGTTTCAGAAGCTGAATGGCAGGCCGGTGCAACTCTCTACTTCTCCACTGGTGATGGTTCCACAACCTTCCGTTTACCAGATATGATGCAAGGGCAGGCTTTTCGTGCACCTACTAAGGGAGAAGAAGATGCTGGAGTAGTTAAAGATCAGATTCCTTATATTACCGTAATCAATGGGGTTTCTCCTAATGATACTGGTGAGGTAACTCTCGGTAATGTTGTTACTAAGAATGTTTGGGACGGTACTTCTGGTGAAGTTCTTTTACGAGGTGCTTTCGGTTTAGGGGGTTCTGGTATCCAGTTAAATGAGCCTGATCTAGTTTCATTCTTTAAAGCTATGCGTGCTTTTGGTTCTGGTTACTACAGAAATGATACAGCTATTGGTGGCTTACCTGCATACTCTGCTGGTTTCTATTCTAAAACCGCAGATACCCATTCATTCATTTGCCCACAATATTCTAGTGGTATTGTATTTATCGGTACTATTAATGATGGTCAGTTAGACGGGGAAAATCCTGCTATTCATACTAACGTGTTATACGGTACTGCTAATAAACCTGATCTTAATAATGGCACAGAAGGAACTCTATCAGTCAATAAAGGAGGTACGGGAGTTAGCACGTATGAGGGGGTCCGTAGTAGCTTTAATATTCAGGGAGTTTTTTGTGTTACAAGTGAAGAAAGCGGAGATTTTAATTCTATATCATCTCCAAATGGCAAATTAAATTTACTAATAGCAAATAGTAAAGTTTGGGGGGTACAAGATACCGAGGGTAATATTGCGCCCTTACTTGTAGAAAGAGGTGGTACTGGTGCAACAAATATAAGTCAGGCAAGGAAAAATCTTGGAATTGGTGAAAGTGATATTCCGGTATTCAAAGGCGTAAATCTTACCCTAACTAATGGAGCAAACTCTGGACTTCTATACCTAACAAATAAGAATACAGAAGGTGTGCAACGTACATATTCTAGTATTTATAATGAACTTCAATCTGAGCTAAGTAAGACGACAATACGTAGTAGTAATGATGTGACGGGTAAAACAGCTTTCCTACAATTTGATGAAAATGGTAAATTATACACATCTAGTGTTGAGGCTACTGGAAATATCAAAACAGGAAGTTTAAATTTAAACTATGGCCATACATTTACAATTAATCCTGGCGAGCAAAATACACTACAGATTTCTAACTACGTTGCTGGAATAGACACCTGGTGTGGATATACTAAGTATAACTGGTATAATGATTACGCTATTGCTGGGCTTGTTCGTGGCGGATCCACCCATGTATCTGATTATAGGATTGAGGTTTATAGTCCTGGTGTTGATGCATATAGTTTTCAATTCTTCCCACAAGGTAAGTTGAGAGGGGCATCTTTTAATGGAAGATGTACTCAAGGAGGGTGGGAGATGGATCTAGATGAAAACGCTCATACTATACCTTTTAACGCTAGAAGTATTGGTAATAATAACGGAGGCTGGGTCCCGATTGTATCCGGAGGTTACGCAACTCCATCAGGTTATAGGATTCGTGCGGCATTTGGTGCTATTTCTCCTGGTGCTAGTGGGTGGGGACGTGGCGTTATAAAACTCATGGGCGATAATAGTTACTTTAGAGGATTTGAGTTTCATCCTAGTGGTAATTTAACCACATGGGCCAATTCTCCTGATAATGCTTGGGGTACCGCATTTGAGTTTACTAAGTCACCCTCATCAGACCGTGATCTGAAAAAAGATATTATCTATACTGATGGGAAGGAAGCATATGACCGCGTTATGCAATGGTTGCCCACTTTATTTAAGTATAAAGGACAGACAACACAACGCTATGGGTTTATAGCCCAAGACTTGATGAAAGTTGATCCCCAGTACGTTAAACTAGTTCCTGGTGCACCTGTATTTGAAGATGTAATAGGGATTAATGAGGATGGGGAAGAGTACATCGATCGTAGGATTGAAACGGGTGTTGAAGATGATACTCTAGCGCTAGATAGTAATGTTATGCTTGTTGATTTAGGGGCTGCTGTTATTTATATGAACAGTCAGATGGAACAACAACGAAAAGAGTTGGAAGAGTTAAAGGCTCTAGTAGCTACTCTAGTTAACAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
991b94839ec0f3ffc53f9346b27894bfc8bc6d4d4eeac287bfc2bc1a8fb8ee48
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5851
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50