Protein

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Genbank accession
QIQ64390.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSQRYSPSIPPQEEEELLPFLNEEFVRVGQTLNDVADGYWGVSTEPPKKLKPGTIKYFAPGVVGPVSGIYYYDLDNQWKLAGTKPKDLPGEFVLFTPANNHQAMGTCAYRMNTAKDEVWITLLASGGNYTDGATVLDLPQAYWPPAELFIPAFSSIIPAQSQITYPPPSDPSAPPLDQVFDVLNRATIQTAVVNQAMFKLTANGRLLIQGIPQGAIFGGTFTYPLVVTP
Physico‐chemical
properties
protein length:229 AA
molecular weight: 25026,17880 Da
isoelectric point:4,66042
aromaticity:0,11354
hydropathy:-0,13057

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Epa1
[NCBI] 		2719568 Uroviricota > Caudoviricetes > Bruynoghevirus >
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIQ64390.1 [NCBI]
Genbank nucleotide accession
MT108723.1 [NCBI]
CDS location
range 12283 -> 12972
strand +
CDS
ATGAGTCAAAGGTACAGCCCCTCGATTCCGCCACAGGAAGAGGAGGAACTGCTGCCCTTCCTTAATGAGGAATTCGTTAGGGTTGGACAGACTCTCAATGATGTGGCTGATGGCTATTGGGGGGTTTCTACGGAGCCCCCTAAGAAGCTTAAGCCAGGAACGATTAAGTATTTTGCCCCTGGGGTAGTAGGTCCTGTATCAGGTATCTATTATTATGACTTGGATAACCAGTGGAAACTCGCCGGTACTAAACCCAAGGATCTCCCAGGGGAGTTTGTTCTATTCACCCCAGCTAATAATCATCAGGCCATGGGCACCTGTGCTTACCGGATGAATACAGCTAAGGATGAAGTGTGGATTACCCTTCTGGCATCTGGAGGGAATTATACTGACGGTGCTACGGTGTTGGACCTTCCCCAAGCCTACTGGCCTCCTGCGGAGCTGTTCATCCCAGCATTCTCCAGTATCATTCCAGCTCAAAGCCAGATCACCTATCCACCACCCTCAGATCCCTCAGCGCCCCCTCTGGATCAAGTCTTTGATGTACTCAACAGGGCTACCATCCAGACTGCTGTGGTCAACCAAGCGATGTTTAAGCTTACGGCTAATGGTCGTCTGCTTATCCAAGGAATTCCCCAAGGTGCTATCTTCGGGGGTACGTTTACTTATCCCCTAGTGGTGACTCCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fd7a68adccb001e91e55ab92c782d0c2daaad33de015f77464b2e6b31eba637b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7418
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Nine Phages Lytic against Multidrug-Resistant Pseudomonas aeruginosa Farlow,J., Freyberger,H.R., He,Y., Ward,A.M., Rutvisuttinunt,W., Li,T., Jacobs,A.C., Nikolich,M.P. and Filippov,A. 2020-07-16 — GenBank