Protein

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Genbank accession
QBQ72146.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,95
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAKLRPLQVGGVPGCANIPGGEDCQCWPEWTADNGYFFGDVVQQGGVLYYATRDVPPGTPFLAADWAPYRPAATAIPPHNENSTYFQYQPVAYNDKLYTARTDLPPGPFDPANWQEISVEGLVEVVDSATIDFTGTGAAGDPVSADVKLDPDPDNLLSATANGLILTADNIPFPDPSQILISEEVTLRVDYVTGDDATADGTLAKPFATVSAAIGVATTGDRVEIYPGTYIGNFAPKSDVTVVGLEGVVIDGDVTIAAGVSGALVDGLFVDGSVLVNGANGSVTFRNSRVTENVLATGNNTGVYRFENCDIETAAIVNGTGNAEFIFSGGVSENDFFLNSPGTMIVENRSRVKAVLHEAGNMIVQNIGVIESLASTPDNGFLAVMSSSLFDPLTSTYGTISKTGLCPFVFQDFGRDNTDTTALNGPKFIVSNGRDVHGNYDPAFYALPNGQTLNSHFAGIDAALETLQEYSPLDRLVPVDLGFSFTGGWTDGETIGAHVVSRSTIVPENMAGSVFSTDSSTLDGVLNIVVGPSVVGTVTIVDGIATFASSSFNLDPGQTVRVVTTSDGTFDYAALTLVGHREVVYVN
Physico‐chemical
properties
protein length:587 AA
molecular weight: 61618,62200 Da
isoelectric point:4,09260
aromaticity:0,09029
hydropathy:0,05792

Domains

Domains [InterPro]
G3DSA:2.10.10.90
STR
28–117
G3DSA:2.10.10.90 IPR011050 DC_1915
DC_1512
ATT
30–185
DC_1512 IPR012334
QBQ72146.1
1 587
Architecture
ATT
STR
ATT 28-185 | STR 186-587
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ72146.1
1 587
Domain Start End Length (AA) Confidence
N-terminal 1 233 233 0,9649
Central domain 234 456 224 0,8807
C-terminal 457 587 130 0,6885
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-233
Central
234-456
C-terminal
457-587

Taxonomy

  Name Taxonomy ID Lineage
Phage Agrobacterium phage Milano
[NCBI] 		2557550 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Agrobacterium tumefaciens
[NCBI] 		358 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72146.1 [NCBI]
Genbank nucleotide accession
MK637516.2 [NCBI]
CDS location
range 65370 -> 67133
strand +
CDS
ATGGCAAAACTTCGCCCGCTTCAAGTTGGTGGCGTTCCCGGTTGCGCTAATATTCCCGGTGGCGAAGATTGCCAGTGCTGGCCCGAATGGACGGCTGACAACGGCTATTTCTTCGGCGACGTCGTGCAGCAAGGCGGGGTTCTCTATTACGCGACGCGCGATGTTCCGCCCGGTACGCCGTTTCTTGCCGCTGATTGGGCACCATATCGCCCCGCCGCAACGGCCATTCCTCCGCACAATGAGAATTCTACCTATTTTCAATATCAGCCGGTGGCCTACAATGACAAACTTTATACGGCGCGGACCGATCTGCCGCCCGGTCCGTTTGATCCTGCCAATTGGCAGGAAATTTCAGTCGAAGGTTTGGTCGAAGTCGTCGACAGTGCGACGATAGACTTCACCGGCACGGGTGCGGCTGGCGATCCGGTTTCCGCTGACGTCAAGCTTGATCCTGACCCCGACAACCTTCTATCGGCAACGGCGAACGGCCTCATCCTGACCGCCGACAACATCCCGTTCCCTGACCCGTCGCAAATTCTCATTTCGGAGGAAGTGACTTTGCGCGTCGATTACGTGACGGGTGATGATGCCACCGCTGACGGCACGCTTGCAAAACCATTCGCGACGGTTTCCGCTGCGATCGGCGTCGCGACGACCGGTGACCGCGTCGAGATTTACCCCGGCACATATATCGGAAACTTCGCGCCGAAATCCGACGTCACGGTTGTCGGGCTGGAAGGTGTTGTTATCGACGGCGACGTGACGATTGCGGCGGGTGTAAGCGGCGCGCTTGTCGACGGTCTGTTTGTCGACGGTTCCGTTCTGGTAAACGGCGCGAACGGCAGTGTGACATTCCGCAATTCACGGGTGACGGAAAACGTTCTGGCAACCGGAAATAACACGGGTGTTTATCGCTTCGAGAATTGCGATATCGAAACCGCTGCCATTGTCAACGGAACTGGAAACGCTGAATTCATCTTCAGCGGCGGTGTGTCCGAAAACGACTTCTTCCTGAATTCGCCCGGTACGATGATTGTCGAAAATCGGTCCCGCGTGAAAGCCGTTCTGCACGAAGCGGGCAATATGATCGTGCAGAACATCGGCGTTATCGAATCGTTGGCGTCGACGCCTGACAATGGCTTCCTTGCGGTCATGTCTTCTTCGTTGTTCGACCCGCTGACAAGCACATACGGCACGATCAGCAAAACCGGACTTTGCCCGTTCGTGTTCCAAGATTTCGGGCGTGACAACACCGATACGACCGCGCTGAACGGTCCGAAATTCATCGTTTCTAACGGTCGTGATGTTCACGGAAATTACGATCCTGCGTTCTATGCGCTGCCAAACGGTCAAACGCTGAACTCACACTTTGCGGGTATCGACGCGGCGCTTGAAACGCTTCAGGAATATTCACCGCTGGACCGCCTTGTTCCCGTCGATCTTGGCTTCAGCTTTACGGGCGGTTGGACCGACGGCGAGACGATCGGCGCGCACGTTGTTTCCCGATCGACGATCGTTCCTGAAAACATGGCGGGTTCCGTTTTTTCGACGGATAGTTCAACGCTCGACGGCGTTTTGAACATCGTTGTCGGCCCGTCTGTCGTCGGAACCGTGACGATCGTTGACGGCATAGCAACTTTCGCGTCTTCCTCTTTCAATCTTGATCCGGGGCAGACTGTGCGCGTGGTGACGACGTCTGACGGAACGTTTGATTACGCCGCGCTTACTCTTGTCGGGCATCGCGAAGTCGTTTACGTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a84060955bbf14d6d89cc14be033aa5408f14c4c7f788008829b0bd807e39b18
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7254
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50