Protein

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Genbank accession

YP_007006710.1 [GenBank]

Protein name

gp103

RBP type

Evidence RBPdetect2

Probability 0,60

Protein sequence

MISRTIKASIDRKQPTPHIFKIDTRLHTSGVTNNSFVLPTSITSIVPDSFTVDWGDGTPKEKIKATSTTLSYVSHDYSEPGEYIIEIQGVVTRWNHTPTADPNFNDYKRCVVEVLQFGETLTRRSNNNPSNFGITFNGYSNCTFENVTDVPKINDPLYPWSLAYFFQGCTKLTFVNNLELWNTSLVLSMEGMFNGCVLFNQSLISFDVSKVMIMAYMFANCKVFNQNLNSWNVSNVTTMQSMFVGCSVYNQPMNYWDVGKVNNFNSMFSRCVVFNQDLSTWNVSQATNTTSMFAACNKFNSDVSNWNVSKMTSANNMFQECFDFNSDVSNWDVSKVVNFSSMFMRCSSFNRNLSSWSMVSATNTSNMLIGCSVFNSPVPTAYSDKLLNVAGMFKSCLVFNQPVSFNNAININSADAIFELCGEFNSTVNIPSDKVTAYGAAFASCRKFNQPLTGINTTSTTHASRMFANCDVLNQSISHFNLNKLILSSSMFYGCLKFNQSFAGKMTSGTVTNTNNMFANCQEFTGTGVESFNMSNVTNTNGMFLQCYVFDGNVSGWNVGKVIDMQGMFQDCFVFDRSLRTWNVSSVQYITKMLHSCAKFDNWLPSGFTSLLSMNREYPLNKTSYSGDPINIVTQNPLFNDEFIKDMLDNSKLNNKTINMFGNQVTEIGEATITSMNSSGWNVYNYTVQQPMKLRVNAHTDGKFALPILWMRRSDIQVIINIDTQDFDSFLPEKQTFKWIAPNKNIVSPTVNIKNSDPLADEMALGTGVTDEVIHVYGKLSTFGEYSMYSGTMNQKGKLIQYIDDWGEMLRFGNVSMYGMINLKAIPAFKPNTRVWNCKYMFSEIKFNFDVSGLDTSLSKNMSNMFRDCWAFNNPVNFNTSNVTDMSNMFLRSSVFNQSVNFDTSNVTSMLNMFYGSTAFNKPVNFNTSNVTDMYQMFYDCSSFNSSITFSDTSKVTNMSSMFRNCTVFNQLVNFNTVNVTNMSTMFGSCVIFDQSIDFNTSNVTNMSGMLAGCRMFNQPLNFDTSNVTNMSAMFSDCRKFNQLLNFDTKKVTNMSSMFYQCLVFNQPVVFQTPLLTNTASMFYNCGAFNNSVELDTSNVTDMSNMFNECRLFDQPIDFDTGKVKNMAHMFYNCRVFNQSVFFNTNEVTNMANMFSNCYLFNQPIVFQTPLVTNMSEMFNGCAVFNQSINFNTPKLAGSLRSMFGSCVKLTQPVILSDTSRVTNMSYMFSECELFNYPVSLDTSSVTDTQGMFRGCTSLNQELSLDLSKCQLSGNMFQRCTSLNKQLNLTNTGLIRAMSGMFNLCSSLNMSFESFDFKSITTMQSLNSFISNDNNNSIPLSVENYDSLLKRLSETLVFSGLNKTNSFRADGLKYSLTGKQYRDVLTTNGVTVVDAGLYVDRSNPFKFTIDTRNVSSASAMDNEFKLPMSSVLSPLVVEWGDGNESMIFNLSENNTHIYQTAGIYTISIHGEVKSFNFLNTDVHNLKMLSVDNWGKLTFISNGMFNRTISFFNCTNLKLDNVIGVPIIESGANFVELFHLCTSLVTVNGLENWDFSGVVSMENMFAFCTNFNQPIVINNAVSLNRTTRMFIRCSNFNSTVSMYTDNVEQMTSMFAECKKLNSQVTFTNTGNVSDFSSLFSECSLFNQPIVLDTTSAVLLRNMFFRCDKFNQPINLDTKTVVSASSMFMWCVSFNQPINFDMRNATDISDMFANCSALNSQVTLTNANKITTYNYMFSGCTSFNKPIDFDSTEACEDFHGMFNESNAFNQSFQGFNFSSVTDATKIRSILSRMVTVTPPPLSPANYDSLLERLANTLVFSNISGVCELWASGLKYTAQGAIYRNHLIANGFTITDGGQV

Physico‐chemical properties

protein length:	1857 AA
molecular weight:	208822,16570 Da
isoelectric point:	5,46702
aromaticity:	0,12278
hydropathy:	-0,12606

Domains

Domains [InterPro]

IPR013783
STR
21–96

IPR013783 IPR005046 IPR005046 DC_0103 IPR005046 DC_0103 IPR011889 DC_0103 IPR005046 DC_0103 DC_1935

IPR035986
STR
26–87

IPR035986 IPR011889 DC_1935 DC_0103 DC_0103 IPR005046 IPR005046 DC_0103 IPR005046 IPR005046

IPR000601
ENZ
47–87

IPR000601 IPR005046 IPR011889 IPR011889 DC_0103 DC_1935

DC_1384
RBD
69–256

DC_1384

YP_007006710.1

1 1857

Architecture

STR

RBD

STR

RBD

STR

RBD

STR

RBD

STR

STR 21-96 | RBD 97-160 | STR 161-385 | STR 389-602 | RBD 603-835 | STR 836-922 | RBD 923-962 | STR 963-1263 | RBD 1264-1533 | STR 1534-1825 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR013783	STR	IPR013783	21	96	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR035986	STR	IPR035986	26	87	Merged direct domain	PKD domain superfamily	Central	Low	Positional only	4 proteins / 4 hits
IPR000601	ENZ	DC_0012	47	87	InterPro cluster	PKD domain	C-terminal	High	Text match	11 proteins / 28 hits
DC_1384	RBD	DC_1384	69	256	Novel HMM	DC_1384	C-terminal	Low	Positional only	20 proteins / 20 hits
IPR005046	STR	DC_0253	161	281	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits
IPR011889	Unmapped	-	217	240	InterPro	Bacterial surface protein 26-residue repeat	-	-	-	-
DC_1935	STR	DC_1935	245	385	Novel HMM	DC_1935	Central	Low	Positional only	24 proteins / 24 hits
IPR005046	STR	DC_0253	389	502	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits
DC_0103	RBD	DC_0103	429	528	Novel HMM	DC_0103	C-terminal	Low	Positional only	30 proteins / 30 hits
DC_0103	RBD	DC_0103	505	726	Novel HMM	DC_0103	C-terminal	Low	Positional only	30 proteins / 30 hits
IPR005046	STR	DC_0253	512	602	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits
DC_0103	RBD	DC_0103	713	934	Novel HMM	DC_0103	C-terminal	Low	Positional only	30 proteins / 30 hits
IPR005046	STR	DC_0253	836	922	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits
IPR011889	Unmapped	-	865	888	InterPro	Bacterial surface protein 26-residue repeat	-	-	-	-
IPR011889	Unmapped	-	913	935	InterPro	Bacterial surface protein 26-residue repeat	-	-	-	-
DC_0103	RBD	DC_0103	923	1022	Novel HMM	DC_0103	C-terminal	Low	Positional only	30 proteins / 30 hits
IPR005046	STR	DC_0253	963	1068	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits
DC_0103	RBD	DC_0103	998	1093	Novel HMM	DC_0103	C-terminal	Low	Positional only	30 proteins / 30 hits
IPR011889	Unmapped	-	1034	1057	InterPro	Bacterial surface protein 26-residue repeat	-	-	-	-
DC_0103	RBD	DC_0103	1070	1166	Novel HMM	DC_0103	C-terminal	Low	Positional only	30 proteins / 30 hits
IPR005046	STR	DC_0253	1073	1165	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits
IPR005046	STR	DC_0253	1167	1263	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits
DC_0103	RBD	DC_0103	1196	1399	Novel HMM	DC_0103	C-terminal	Low	Positional only	30 proteins / 30 hits
DC_0103	RBD	DC_0103	1384	1624	Novel HMM	DC_0103	C-terminal	Low	Positional only	30 proteins / 30 hits
IPR005046	STR	DC_0253	1534	1648	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits
DC_1935	STR	DC_1935	1597	1726	Novel HMM	DC_1935	Central	Low	Positional only	24 proteins / 24 hits
DC_1935	STR	DC_1935	1695	1825	Novel HMM	DC_1935	Central	Low	Positional only	24 proteins / 24 hits
IPR005046	STR	DC_0253	1697	1783	InterPro cluster	Protein of unknown function DUF285	Central	Low	Positional only	37 proteins / 182 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Sphingomonas phage PAU [NCBI]	1150991	No lineage information
Host	Sphingomonas paucimobilis [NCBI]	13689	Bacteria > Proteobacteria > Alphaproteobacteria > Sphingomonadales > Sphingomonadaceae > Sphingomonas

Coding sequence (CDS)

Genbank protein accession

YP_007006710.1 [NCBI]

Genbank nucleotide accession

NC_019521 [NCBI]

CDS location

range 77211 -> 82784
strand +

CDS

ATGATTTCAAGAACAATTAAAGCATCAATTGACAGGAAGCAACCGACTCCACATATTTTCAAGATAGATACTAGATTACATACATCAGGTGTGACAAATAATAGTTTTGTTTTACCTACTTCTATAACTAGTATAGTACCTGATTCTTTTACAGTAGACTGGGGGGATGGAACACCTAAAGAAAAAATAAAAGCCACTTCTACCACATTGTCATACGTTTCTCATGATTATTCAGAACCGGGTGAATATATTATTGAAATTCAAGGTGTCGTTACAAGATGGAATCATACCCCAACAGCCGATCCGAATTTCAATGATTATAAAAGATGTGTTGTTGAAGTATTGCAATTTGGTGAAACTCTCACAAGGAGAAGTAACAACAACCCTTCAAATTTTGGAATAACATTCAATGGATATAGTAATTGTACGTTTGAGAATGTAACGGATGTACCTAAAATAAACGATCCGTTATATCCATGGAGTTTAGCATATTTCTTTCAGGGGTGTACCAAACTTACATTCGTAAATAACTTAGAATTGTGGAATACATCATTGGTTTTATCCATGGAGGGAATGTTCAACGGGTGTGTATTATTCAACCAATCATTGATTTCTTTTGATGTATCTAAAGTCATGATCATGGCTTATATGTTCGCTAATTGTAAGGTATTCAATCAGAATTTAAATTCTTGGAATGTAAGTAATGTAACCACTATGCAATCTATGTTTGTAGGGTGTAGTGTTTATAACCAACCAATGAATTATTGGGATGTGGGTAAGGTGAATAATTTCAATTCGATGTTCTCAAGGTGTGTAGTATTCAATCAAGACCTAAGTACATGGAACGTATCTCAAGCAACTAACACCACAAGCATGTTTGCCGCTTGTAATAAATTTAATTCTGATGTTAGTAATTGGAATGTCAGTAAAATGACATCAGCTAACAATATGTTTCAGGAATGCTTCGACTTCAATTCCGATGTGAGTAACTGGGATGTTTCCAAAGTCGTTAATTTCTCATCGATGTTCATGCGGTGTAGTTCGTTCAATCGTAATCTATCAAGTTGGTCTATGGTTTCAGCAACCAATACTTCCAATATGTTGATAGGTTGTTCAGTATTTAATTCACCAGTACCGACTGCATATTCTGATAAACTTCTGAACGTTGCGGGTATGTTCAAAAGTTGTTTGGTATTCAATCAACCAGTTAGTTTCAATAATGCAATAAACATTAATAGTGCTGATGCTATATTTGAGTTATGTGGTGAATTTAATAGTACTGTGAACATACCTTCTGATAAAGTTACAGCATACGGGGCAGCTTTCGCTAGTTGTAGAAAGTTTAACCAACCATTAACTGGTATTAATACTACTTCAACTACTCACGCTTCTAGAATGTTTGCTAACTGTGATGTTCTTAATCAGTCTATTAGTCATTTCAATTTGAACAAATTGATATTATCTAGCAGTATGTTCTATGGTTGTTTGAAATTTAATCAATCATTTGCTGGAAAAATGACTTCAGGTACTGTTACTAACACTAACAATATGTTCGCTAACTGTCAAGAATTTACTGGTACTGGTGTTGAATCCTTTAACATGAGTAACGTTACTAATACTAATGGTATGTTCTTACAATGTTATGTTTTCGACGGTAACGTAAGTGGATGGAATGTTGGTAAGGTCATTGACATGCAAGGTATGTTCCAAGACTGTTTCGTATTTGATAGAAGTCTTAGAACATGGAATGTTAGTTCTGTACAATATATTACAAAAATGTTACATAGCTGTGCTAAATTTGACAACTGGTTACCAAGTGGATTTACTAGTTTGTTAAGTATGAACAGAGAATATCCTTTGAACAAAACTTCTTATAGTGGTGATCCTATCAATATAGTTACACAGAATCCGTTATTCAATGATGAATTCATTAAGGACATGCTTGATAATTCCAAACTGAATAACAAGACTATTAATATGTTTGGTAATCAGGTAACAGAAATAGGCGAAGCCACAATAACATCAATGAATTCTAGTGGTTGGAATGTATATAACTATACTGTTCAACAGCCTATGAAACTACGTGTAAATGCACACACTGACGGTAAATTCGCTCTTCCAATATTATGGATGAGACGTTCTGATATACAAGTAATCATTAACATTGATACTCAGGACTTTGACTCATTCTTACCAGAAAAACAAACATTCAAGTGGATAGCACCAAATAAAAACATAGTTTCACCGACAGTAAACATAAAAAATAGTGACCCACTTGCTGATGAAATGGCATTAGGTACAGGTGTTACTGATGAGGTGATCCATGTGTACGGTAAACTTTCCACATTTGGTGAATATTCAATGTATTCAGGTACTATGAATCAAAAAGGTAAGTTGATACAATATATTGATGACTGGGGTGAGATGTTAAGATTCGGTAACGTTTCAATGTATGGGATGATCAATTTAAAAGCAATACCTGCATTCAAACCAAATACTAGGGTTTGGAATTGTAAGTATATGTTCTCTGAAATCAAATTCAATTTTGATGTCAGTGGATTAGATACTTCATTATCTAAAAACATGTCGAATATGTTTAGAGATTGTTGGGCTTTTAATAACCCGGTGAATTTCAACACTAGTAATGTAACTGATATGTCTAACATGTTCCTTAGAAGTTCAGTATTCAATCAATCTGTTAATTTCGATACAAGTAATGTTACTAGTATGTTGAATATGTTCTATGGAAGTACTGCCTTTAACAAACCAGTAAATTTCAACACTAGTAATGTAACTGACATGTATCAAATGTTTTATGACTGTTCATCATTTAATAGTTCTATTACTTTTTCTGATACTAGTAAAGTAACTAATATGTCAAGCATGTTCAGAAATTGCACTGTTTTTAATCAACTAGTAAATTTCAACACTGTTAATGTAACAAATATGTCCACTATGTTTGGTAGTTGTGTCATATTCGATCAGTCAATCGATTTCAATACTAGTAATGTCACTAACATGTCAGGTATGCTAGCTGGATGTAGGATGTTCAATCAACCTTTAAATTTTGATACTAGTAACGTCACTAACATGTCAGCTATGTTTAGTGATTGTCGTAAGTTCAATCAGTTATTAAATTTCGATACTAAAAAGGTAACGAATATGTCAAGCATGTTTTATCAATGTTTAGTATTCAATCAACCTGTAGTATTTCAGACTCCTTTGTTAACTAATACAGCAAGCATGTTTTATAATTGCGGTGCATTCAATAATTCTGTAGAATTAGATACTAGTAATGTAACAGACATGTCGAATATGTTTAATGAATGTCGCTTATTTGATCAACCGATCGATTTCGATACAGGTAAGGTAAAAAATATGGCACACATGTTCTATAATTGCCGAGTATTCAATCAATCGGTATTCTTCAATACTAATGAGGTTACAAATATGGCGAATATGTTCTCGAATTGTTATTTATTTAACCAACCGATTGTATTTCAGACCCCGTTAGTAACTAATATGAGTGAAATGTTTAATGGATGTGCTGTATTCAATCAATCTATTAACTTCAATACACCGAAATTAGCAGGATCGTTGCGAAGTATGTTCGGTTCATGTGTTAAATTAACACAACCAGTAATCCTATCCGACACAAGTAGGGTTACAAACATGTCATATATGTTCAGTGAATGTGAATTATTCAACTACCCAGTCAGTTTAGATACGTCATCAGTAACTGACACCCAAGGAATGTTCAGGGGGTGTACTTCATTAAACCAAGAATTATCATTAGATTTATCGAAATGTCAATTGAGTGGTAACATGTTTCAGAGATGTACCTCATTGAATAAGCAACTTAATTTAACTAACACTGGTTTGATTAGAGCTATGTCAGGTATGTTTAATTTATGTTCTTCTTTGAACATGAGTTTCGAATCTTTCGATTTCAAATCTATAACTACTATGCAAAGTCTTAATAGTTTCATATCGAATGATAACAATAATTCGATACCATTATCAGTTGAAAACTATGATAGCTTGCTTAAGAGGTTATCAGAAACATTGGTGTTTAGTGGACTGAATAAGACAAATTCTTTTAGGGCTGATGGGCTTAAATATTCATTGACTGGAAAACAATACAGGGACGTACTTACAACCAATGGAGTTACTGTGGTGGACGCAGGATTGTATGTCGATAGAAGTAATCCATTTAAATTTACCATTGATACTAGGAATGTAAGTTCAGCTAGTGCGATGGATAATGAGTTTAAGTTACCAATGTCTAGTGTTTTGTCACCATTAGTTGTTGAATGGGGTGATGGTAATGAATCGATGATTTTTAATTTATCGGAAAATAATACACATATTTACCAAACAGCAGGTATTTACACGATTAGTATACATGGTGAGGTTAAATCATTTAACTTCCTAAATACTGACGTGCATAACTTGAAGATGCTTAGTGTTGATAACTGGGGTAAATTAACATTCATAAGTAATGGTATGTTTAATAGAACTATATCGTTTTTTAACTGCACTAATCTAAAACTGGATAATGTTATTGGTGTACCGATCATAGAATCAGGGGCTAATTTTGTAGAGTTATTCCATTTATGTACGTCACTGGTAACTGTTAATGGTCTAGAAAATTGGGATTTCAGTGGGGTTGTTTCGATGGAGAATATGTTCGCTTTTTGTACAAATTTCAATCAACCTATAGTAATAAATAACGCTGTTAGTTTAAACCGTACCACTAGAATGTTCATTAGATGTAGTAATTTTAACAGTACGGTATCGATGTATACAGATAATGTAGAACAAATGACCAGTATGTTTGCTGAATGTAAAAAGTTAAATAGTCAGGTAACATTTACAAATACGGGTAATGTTAGTGATTTTTCATCATTATTTTCAGAATGTTCGTTATTCAACCAACCAATTGTTTTAGATACTACTTCGGCAGTATTATTGAGAAATATGTTTTTTAGGTGTGATAAATTCAATCAACCAATTAACTTAGATACAAAAACAGTGGTGTCTGCAAGTAGTATGTTTATGTGGTGTGTTTCATTCAACCAACCAATTAATTTTGATATGCGTAATGCCACAGATATCAGCGATATGTTTGCTAATTGTAGTGCTTTGAATAGTCAGGTTACATTAACCAATGCTAATAAGATAACCACATATAATTACATGTTCAGTGGTTGTACATCATTCAATAAACCAATTGATTTTGATTCTACTGAAGCATGTGAAGATTTCCACGGAATGTTCAATGAAAGTAATGCATTTAACCAAAGTTTCCAAGGATTCAATTTCAGCAGTGTTACCGATGCCACTAAAATAAGGAGTATATTATCTAGAATGGTTACTGTAACTCCACCACCTTTATCACCCGCTAATTACGATTCACTTCTCGAAAGATTGGCAAATACACTTGTGTTCTCAAATATATCAGGTGTTTGTGAGTTATGGGCTAGTGGTTTAAAATATACTGCACAGGGTGCTATATATAGAAATCACTTAATAGCTAACGGATTCACCATTACTGACGGTGGTCAAGTTTAA

Genome Context

Tertiary structure

PDB ID

579d7d3aa37948943f9534fb5ded6693d2b0cea7c4d0ceca519b276853e52600

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,5732

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence