Protein

View in Explore
Genbank accession
UYE96877.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MTSPKKITQFTAATEVADNDVILFVDTSDTSSSAEGTTKKTTVSAVETNIRAGLNINNWNTAYGWGDHASEGYLTSYTETDPVFTAHPANGITSTIIGQWNTAYGWGNHATQGYLQSIATQNIGSLNDVSINSGTLATNQVLKWNGTSWINGTGGGGGGGTTINELNDVGDVNITSVANDQILRYDASAEEWRNEDLSVTFTETDTLATVTGRGNTTSADIQFGSNKAKFGTNAFEIYHNGSNGYIDNATGELYIRDTNATGTNRIFIQPKTGENGIIAYEDGQVELYHDNQKKFETTSNGVEVTGVAVADSFNIANNNATIAGTTGANRDIKVIGGAPYYYDGTAWREFYLIDGSVTTLQPDTDWGNVMIRSTFDSNINDVKYNVTPAMVKSFNSTSTAIDIVQAPVKVGVGAVRINGGAEAMSRLEYDVSNHTNYSFTGAWTMEAWVKLDSTSFTATYQSIFSASASNSNDDFSLMVSNNNTGYSSVSWYNEANTSHSSQNGTFIGSISTNSITNAYAHVALVRDPGDAKIRFYFNGTKVGNDITDNEIQQPDVFNLGGHYGNNYNRSFDGYFDDLRISKSARYTANFTPSTTQLPVSGSTTQVVTRPQIIQGEIDLGSSPTWTGTSGVTVSQQSSGTYRLTFATAYSAITDYIVFAQAMDQSAPAYVQADRATGRVDFEIKSQSANAAVNDGSIAVQVFNKMV
Physico‐chemical
properties
protein length:706 AA
molecular weight: 75875,54300 Da
isoelectric point:4,56903
aromaticity:0,10198
hydropathy:-0,37691

Domains

Domains [InterPro]
DC_2081
STR
83–238
DC_2081 G3DSA:2.60.120.200
IPR013320
STR
431–587
IPR013320 DC_0994
IPR013320
STR
431–595
IPR013320
PF13385
LEC
435–585
PF13385
UYE96877.1
1 706
Architecture
STR
STR
RBD
STR 83-238 | STR 425-647 | RBD 648-705 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM66
[NCBI] 		2969442 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CC9605
[NCBI] 		110662 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE96877.1 [NCBI]
Genbank nucleotide accession
OP053360.1 [NCBI]
CDS location
range 115957 -> 118077
strand -
CDS
ATGACCTCCCCAAAAAAGATAACTCAATTTACTGCAGCAACGGAAGTTGCAGATAATGACGTAATATTATTTGTAGATACTAGCGATACATCTTCTTCCGCTGAAGGAACTACAAAGAAAACGACAGTTTCAGCTGTAGAGACTAATATCAGAGCTGGATTGAATATTAATAATTGGAATACTGCGTATGGCTGGGGAGATCATGCTAGCGAAGGTTATCTTACAAGCTACACGGAGACAGACCCAGTCTTTACGGCCCACCCCGCTAACGGAATTACTTCTACAATTATTGGCCAGTGGAACACCGCTTACGGCTGGGGTAACCATGCAACACAAGGCTATCTTCAGTCTATTGCCACTCAGAACATTGGCTCTCTAAACGATGTATCGATTAACTCTGGAACTTTAGCAACAAACCAAGTTCTTAAGTGGAACGGGACGTCATGGATTAATGGAACAGGCGGAGGTGGAGGTGGTGGTACCACTATCAATGAATTAAATGATGTTGGCGATGTAAATATAACCTCTGTTGCTAATGATCAAATTCTTAGATATGATGCTTCAGCGGAAGAGTGGAGAAACGAAGATCTTTCTGTGACTTTTACAGAGACTGATACTCTTGCTACTGTAACCGGAAGAGGTAACACTACTAGTGCAGATATACAATTTGGTTCCAACAAAGCAAAATTTGGTACTAATGCTTTTGAAATTTATCATAATGGATCCAATGGTTATATAGATAATGCTACAGGTGAATTGTACATTAGAGATACTAACGCAACTGGCACTAATAGGATCTTTATTCAACCAAAAACTGGCGAGAACGGAATTATTGCATACGAAGATGGTCAAGTAGAACTTTACCATGATAATCAAAAGAAATTTGAAACAACTTCTAATGGCGTAGAGGTTACAGGAGTAGCTGTAGCAGACTCTTTTAATATTGCAAATAATAACGCCACTATTGCCGGGACAACTGGGGCAAATAGAGATATCAAAGTAATTGGTGGAGCTCCATACTACTATGATGGTACTGCTTGGAGAGAATTTTATCTCATAGATGGATCAGTTACAACACTCCAGCCTGATACTGACTGGGGCAACGTTATGATTCGCTCGACGTTTGATAGTAACATAAACGACGTTAAGTACAATGTTACTCCGGCTATGGTAAAAAGTTTTAATAGTACCTCTACGGCAATAGATATTGTTCAAGCACCAGTAAAAGTAGGTGTAGGGGCTGTGAGAATAAATGGCGGAGCGGAAGCAATGTCAAGGCTCGAGTACGATGTCTCAAACCACACTAACTATAGTTTTACCGGCGCTTGGACCATGGAAGCGTGGGTAAAGCTTGATTCGACCTCTTTTACTGCTACGTATCAGTCTATATTTTCAGCATCAGCATCAAACTCTAATGATGACTTTAGTTTAATGGTGTCGAATAATAACACCGGTTATTCTAGCGTTTCTTGGTATAATGAAGCAAACACATCCCATTCGTCACAAAACGGAACCTTCATAGGATCAATTTCCACTAATTCAATAACCAACGCATATGCTCATGTTGCTCTTGTTAGAGATCCAGGCGATGCAAAAATTAGATTTTATTTCAATGGGACTAAAGTAGGGAACGATATAACGGATAACGAAATACAACAACCTGATGTTTTTAACTTGGGTGGGCATTATGGTAATAACTATAATCGTAGTTTTGACGGATACTTTGACGATTTGAGAATTTCAAAGTCTGCAAGATACACCGCAAACTTTACACCTTCAACAACTCAACTTCCTGTAAGTGGTAGTACTACTCAGGTTGTTACAAGACCTCAAATTATCCAAGGAGAAATCGATCTGGGCTCCAGCCCAACTTGGACGGGTACATCTGGAGTTACGGTATCTCAACAATCTTCTGGTACCTATAGGTTAACATTTGCAACGGCCTATAGCGCAATTACAGATTACATTGTATTTGCACAAGCTATGGATCAATCTGCTCCTGCCTATGTGCAAGCAGATAGGGCAACTGGACGTGTAGATTTTGAAATTAAATCTCAGTCGGCAAATGCCGCTGTTAATGACGGATCGATTGCTGTTCAGGTTTTTAATAAAATGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
69a2eb79752f8c8fb056b33e86d616fd503b248f221361d83a69ea97d84dcdda
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7021
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. — — GenBank