Protein

View in Explore
Genbank accession
QIC52754.1 [GenBank]
Protein name
putative prophage endo-N-neuraminidase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTIIKRADLGQPLTWDELDDNFQQVDNLTAAASAAVSSAAASAIAAAGSATNSLNSANSAASSADDAAASAASAIDALMNSTFEPADFDFTSGGTLDTTDRNKAVYNPADNNWYSWSGTLPKVVAAGEDPLADSNWKPRTDQLLRQELSSEVVGSSGGTMVHLEPGVAPAVWGERSIKNLILDGLAGLRKNFGALGDGGATDGGLRDTQAIEDAHDAMKDVLYRRRGAETDESTISFMLQKGPGILYENGVYKYNGTGLNITTGDTFIFNVRGESALGTKVLLPDGVYLFDFDSNPVYSHLSNMTIHGGLGAVRYKAKGRTTADFHVFSDLRLSRFTECGISNNSIDMPYFRVERSRFYGATASQPIGICVSGLSAGGYIRDCLFSDFRYAIKLAVGDNGTERNGPATPFNIEDNDFYRTGARGAINEDTGEFERFASYDIWIEPGATTNNAGRAIRFAGNKFGQENLITPDAHVLIADSTTGSGLNLNGDRAHVEAQSTGFISGLRFEGNNVNSSNAGYIAPFLRSYTPNLGNCYFSDIYDNDMPSRIIEFSGSITQSQVTNLTRSNVFNAGQCLALQEGGEPKLLSNLDGIFGIEDPLHYYSGHPQSTYYPVGTAKIDFVSLFSAQTSTITASDGTKTAVPCSYGAFTEAVELTMTASTGRLLQTVSGLIAGRKTWLDVEVKRGSSNSVQSVKVEILDSTGVVIWLRRIILLDSLSRWQKVTLPFVPSAAGNCIVRFSAAATYSAGSSTNFIVGNLNVYHNDTPISTGLNSGLSSNWSRQHNVMGTKHEWYDASGNKRAKSSQPLSDTDGVIISANVTP
Physico‐chemical
properties
protein length:821 AA
molecular weight: 87783,17100 Da
isoelectric point:5,01788
aromaticity:0,09013
hydropathy:-0,23143

Domains

Domains [InterPro]
DC_1348
ATT
1–335
DC_1348 DC_0672
G3DSA:2.10.10.80
ATT
83–151
G3DSA:2.10.10.80 IPR011050
QIC52754.1
1 821
Architecture
ATT
STR
RBD
ATT 1-335 | STR 336-569 | RBD 570-821
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIC52754.1
1 821
Domain Start End Length (AA) Confidence
N-terminal 1 207 207 0,9922
Central domain 208 572 366 0,9887
C-terminal 573 821 248 0,9255
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-207
Central
208-572
C-terminal
573-821

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage LAPP1
[NCBI] 		2692422 Viruses > unclassified bacterial viruses >
Host Acinetobacter pittii
[NCBI] 		48296 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIC52754.1 [NCBI]
Genbank nucleotide accession
MN923124 [NCBI]
CDS location
range 11675 -> 14140
strand +
CDS
ATGACCATTATCAAACGCGCAGACCTGGGTCAACCCTTAACGTGGGACGAACTGGATGATAACTTCCAGCAGGTTGATAATTTGACAGCCGCCGCATCAGCGGCTGTATCAAGTGCTGCTGCTTCAGCTATAGCCGCCGCAGGCAGTGCTACGAATTCACTTAATAGTGCGAATAGTGCTGCTAGTTCGGCCGATGACGCCGCAGCATCGGCAGCATCGGCAATCGATGCGCTAATGAATTCAACATTCGAGCCTGCTGATTTCGACTTTACCAGTGGTGGCACTCTTGATACCACTGACCGCAATAAAGCAGTGTACAACCCGGCGGACAATAACTGGTATTCGTGGTCGGGTACGCTGCCGAAGGTTGTCGCGGCTGGGGAAGACCCCCTTGCGGACTCTAACTGGAAACCCCGCACCGACCAGCTATTAAGACAGGAATTATCTTCTGAAGTTGTAGGGTCGTCCGGCGGTACAATGGTCCATCTAGAGCCAGGGGTGGCGCCCGCAGTATGGGGTGAAAGGTCAATAAAGAATTTAATCTTAGATGGTTTGGCCGGGTTACGTAAGAACTTTGGTGCATTAGGGGATGGGGGCGCAACTGATGGCGGATTGAGAGACACTCAAGCGATTGAAGACGCCCATGATGCCATGAAGGACGTTCTTTATCGCCGCCGGGGAGCAGAGACCGATGAAAGCACTATCAGTTTTATGCTTCAAAAAGGACCAGGTATTCTCTATGAGAATGGTGTGTATAAATATAATGGCACTGGTTTAAATATAACCACAGGTGACACCTTCATCTTCAATGTTCGTGGGGAAAGCGCATTAGGGACAAAGGTGTTACTGCCTGATGGTGTGTATCTTTTCGATTTCGACAGCAACCCTGTATATTCTCATTTATCAAACATGACAATACACGGTGGCTTAGGCGCTGTACGATATAAAGCAAAAGGTCGAACCACAGCAGATTTTCACGTATTTAGCGACCTACGCCTTTCTCGGTTCACTGAATGCGGCATTAGTAATAATTCAATTGATATGCCTTACTTTCGGGTGGAGCGTAGTCGTTTCTATGGAGCTACCGCGTCTCAGCCAATCGGCATATGCGTCAGCGGTCTTTCAGCCGGCGGATACATTCGGGATTGCCTTTTTAGCGATTTCAGGTACGCCATTAAGTTAGCTGTCGGGGATAACGGTACAGAACGCAACGGCCCCGCCACTCCGTTCAACATCGAAGACAACGACTTCTACCGCACAGGGGCTCGTGGGGCTATAAATGAGGATACTGGGGAGTTTGAACGTTTTGCCTCTTACGATATCTGGATCGAGCCTGGCGCGACCACTAACAACGCAGGTCGCGCCATCCGGTTTGCGGGTAATAAGTTCGGACAAGAAAACCTGATTACACCCGATGCACATGTGCTCATTGCTGATAGCACTACCGGCAGCGGATTAAACCTAAACGGCGACCGCGCCCACGTTGAGGCACAATCGACCGGATTTATTTCGGGACTACGCTTCGAGGGTAACAACGTCAATTCAAGTAATGCGGGATATATCGCGCCATTCCTGAGAAGCTACACTCCGAACTTAGGTAACTGCTATTTCTCAGACATCTATGATAATGATATGCCGTCGCGCATTATTGAGTTTTCAGGCAGCATCACACAATCGCAAGTAACGAATCTTACTCGAAGCAACGTGTTTAATGCTGGGCAATGTCTGGCATTGCAGGAGGGTGGAGAGCCTAAACTTCTTAGCAATTTGGATGGTATCTTTGGAATCGAAGACCCATTACATTACTATTCCGGGCATCCTCAATCTACCTACTATCCGGTTGGTACGGCTAAGATCGATTTTGTATCACTATTTTCTGCACAAACTTCAACCATAACGGCCTCTGACGGTACTAAAACCGCCGTACCTTGTTCTTATGGTGCTTTTACAGAAGCTGTTGAGCTAACAATGACAGCGTCAACTGGTCGTTTACTTCAAACGGTATCCGGACTTATCGCTGGTAGAAAAACATGGTTAGACGTTGAGGTTAAGCGTGGTTCGTCAAACTCAGTGCAAAGCGTAAAAGTTGAAATACTGGATTCTACAGGGGTGGTAATATGGTTGCGTAGAATAATTTTGCTAGACTCCTTATCGAGATGGCAAAAAGTTACATTGCCGTTTGTGCCATCTGCAGCAGGTAATTGTATAGTCAGATTCAGCGCAGCAGCGACGTACTCAGCTGGTTCTTCTACCAATTTCATAGTTGGTAATCTTAATGTGTATCATAACGATACGCCTATTTCTACAGGGCTTAATAGTGGGCTAAGTTCTAACTGGTCAAGGCAGCACAATGTCATGGGTACTAAACACGAATGGTATGATGCTTCTGGTAACAAGAGAGCCAAGTCAAGTCAACCTCTATCAGACACCGATGGGGTTATAATTAGTGCAAACGTAACACCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
57268b41504258278124d5d14a82baefa587119c16252f0e07dd8d0e205d696e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3089
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage LAPP1 lytic for Acinetobacter pittii Wang,C. and Luo,Y. 2019-04-05 — GenBank