Protein

View in Explore
Genbank accession
XRL29771.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSNNTYQHVSNESRYVKFDPTGTNFPAEITDVQAAIAAISPAGVNGVPDASSTTKGILFLATEQEVIDGTDNTKAVTPATLATRLSYPNATETVYGLTRYSTNDEAIAGVNNESSITPAKFTVALNNAFETRVSTESKNGVIKISSLPQALAGADDTTAMTPLKTQQLAIKLIAQIAPSESTATESAQGVVQLATVAQVRQGTLREGYAISPYTFMNSTATEEYKGVIKLGTQSEVNSNNASVAVTGATLNGRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIHQRGGQTINGTLRINNTLTIASGGANITGTVNMTGGYIQGKRVVTQNEIDRTIPVGAIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGSSSNPGLPDMRGLFVRGSGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQKQQMSYHKHAGGFGEWDDSGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPASQRNSRYTLNRPELIGNETRPWNISLNYIIKVKE
Physico‐chemical
properties
protein length:527 AA
molecular weight: 55876,26120 Da
isoelectric point:7,68335
aromaticity:0,06831
hydropathy:-0,38349

Domains

Domains [InterPro]
DC_0176
STR
1–450
DC_0176
G3DSA:2.10.280.10
Unmapped
246–286
G3DSA:2.10.280.10 G3DSA:2.160.30.10 IPR037053 IPR044916
SSF69349
STR
246–326
SSF69349 SSF88874
IPR015173
STR
246–326
IPR015173 IPR011083 IPR027448
XRL29771.1
1 527
Architecture
STR
ATT
STR
STR 1-329 | ATT 330-400 | STR 401-525 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage sutha
[NCBI] 		3411981 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRL29771.1 [NCBI]
Genbank nucleotide accession
PV245934 [NCBI]
CDS location
range 157313 -> 158896
strand +
CDS
ATGAGTAATAATACATATCAACACGTTTCTAATGAATCTCGCTATGTAAAATTTGATCCAACTGGCACAAATTTTCCGGCAGAGATTACTGATGTTCAGGCTGCTATAGCAGCCATTTCTCCTGCTGGTGTAAATGGAGTTCCTGATGCATCATCAACAACAAAAGGAATTTTATTTCTTGCCACTGAACAGGAAGTTATCGACGGAACTGATAATACCAAAGCAGTTACACCAGCAACGTTGGCAACAAGATTATCTTATCCAAACGCAACTGAAACTGTTTACGGATTAACAAGATATTCAACCAATGATGAAGCGATTGCCGGAGTTAATAATGAATCTTCTATAACTCCTGCTAAATTTACTGTTGCCCTTAATAATGCCTTTGAAACTCGTGTTTCAACTGAATCAAAGAATGGAGTTATTAAAATTTCATCTCTACCGCAAGCATTAGCTGGCGCAGATGATACTACTGCAATGACTCCATTAAAAACGCAGCAGTTAGCTATTAAACTAATTGCGCAAATCGCTCCTTCTGAATCCACAGCTACCGAATCGGCCCAAGGTGTTGTTCAATTAGCGACAGTAGCTCAAGTTCGTCAAGGAACTTTAAGAGAAGGCTATGCAATTTCTCCTTATACGTTCATGAATTCTACTGCTACTGAAGAATATAAAGGCGTAATTAAATTAGGAACACAATCAGAAGTTAACTCGAATAATGCTTCTGTTGCGGTTACTGGTGCAACTCTTAATGGTCGTGGTTCTACAACGTCAATGAGAGGCGTAGTTAAATTAACTACAACTGCCGGCTCACAGAGTGGAGGCGATGCTTCATCAGCATTAGCTTGGAATGCTGATGTTATCCACCAAAGAGGTGGTCAAACGATTAATGGAACACTTCGCATTAATAATACGCTTACAATAGCTTCAGGTGGAGCAAATATTACCGGAACAGTTAACATGACCGGTGGTTATATTCAAGGTAAGCGTGTTGTAACACAGAATGAAATAGATAGAACTATTCCTGTTGGAGCTATTATGATGTGGGCGGCAGATAGTCTTCCTAGTGATGCTTGGCGCTTCTGTCATGGCGGAACTGTTTCAGCATCAGATTGTCCGTTATATGCTTCTAGAATTGGAACAAGATACGGCGGAAGCTCATCAAATCCTGGATTACCTGATATGCGTGGCCTTTTTGTTCGCGGCTCTGGTCGCGGCTCTCACTTAACAAATCCAAATGTTAATGGTAATGACCAATTTGGTAAGCCTAGATTAGGTGTAGGTTGTACTGGTGGATATGTTGGCGAAGTGCAAAAACAGCAGATGTCTTATCATAAACACGCTGGCGGATTTGGTGAATGGGATGATTCTGGAGCATTCGGTAATACCCGTAGATCAAATTTTGTTGGTACACGTAAAGGACTTGACTGGGATAACCGTTCATACTTCACCAATGATGGATATGAAATTGACCCAGCATCACAACGAAATTCTAGATACACACTAAATCGTCCTGAATTAATTGGAAATGAAACACGTCCATGGAACATTTCTTTAAACTACATAATTAAGGTAAAAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8f0b354fc8629c5f1bbd38cc80de21286e01a31c6d5397da4b9a841b1dcc4959
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6852
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of Escherichia phage sutha Imklin,N., Kvederaviciute,K., Aesomnuk,W., Arikit,S., Simoliunas,E. and Nasanit,R. 2022-01-10 — GenBank