Protein

View in Explore
Genbank accession
BDD79350.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSDPVTSYPFDPTGQAASNRIVDEQIVVLPPGDRLFQFAMPVFCPFFEEGHSLKLRDINNNVTPLVMGVDYYLSHKFMDASLATMHPIWGSISFLKPVSGVLLMTYNTLGGDWTIDQATITEILMNTSQNPRITTWEQVVERPVDFPVIDHPWDLADMVGMSEIYGVLENFYTAYLASLDPNGGGGGSSIIIDHINNKNNPHQVTAAQAGAYSTLQIDTMLGGYVKTTGTAANSTQFNGKTYAQMLTDVAGVKVANAAAADNATHAVTADTATNANALGNKSLSQLMTDVAATKVANAAHADNADHATNADLATNSNQLGGQSLTQVLAAAQAQTAADSAKFNGKNYADAKADILSGQAADSALFNGQTLAEIMATLQQATGDASTLNGKSYTDIMAAVKTTKVDNATNADTAANATALGGQTLSQILTSVAGVVPDLAHNSEAVYGYTFDQLVTAIGQSTTWVNGLDYLCVDLDLEHATLQSPANGGTVDNSYHYLYVGSFPIPTTGSSNQYYDPTQELYSSSMDFFIYGQSKTQRLRANLQVNADNKTMGITYYNDTGLDVSVAGLGFRTVASTLKSSDNSQTANVNEVYLKVKTSENVRRVGIFQFTKNSFVIDESESLSLYDSTFVNLNGVTWVNPSQTAQEAANAAAVTAEASARGTADAAIRTDTQAALDALADQINSLTSTPAA
Physico‐chemical
properties
protein length:691 AA
molecular weight: 73252,22130 Da
isoelectric point:4,47103
aromaticity:0,07815
hydropathy:-0,13907

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage FLC8
[NCBI] 		2906466 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia glumae
[NCBI] 		337 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDD79350.1 [NCBI]
Genbank nucleotide accession
LC667450 [NCBI]
CDS location
range 69579 -> 71654
strand +
CDS
ATGTCCGATCCCGTGACCAGCTATCCGTTTGACCCCACAGGGCAGGCGGCTAGCAACCGAATCGTGGATGAACAGATCGTCGTCCTCCCTCCGGGTGACCGACTGTTCCAGTTCGCCATGCCAGTCTTCTGTCCTTTCTTCGAAGAAGGACACTCACTGAAGCTGCGTGATATCAATAACAACGTCACACCATTAGTAATGGGTGTCGACTATTACCTCAGTCACAAGTTCATGGATGCCTCCTTGGCTACCATGCACCCGATCTGGGGTTCGATCAGCTTTCTGAAGCCGGTCAGCGGTGTTCTGCTGATGACGTACAACACCCTCGGTGGTGATTGGACGATCGATCAGGCGACGATTACCGAAATCTTGATGAACACGAGCCAGAACCCGCGTATCACCACGTGGGAACAGGTCGTGGAACGTCCGGTGGATTTCCCGGTGATCGATCACCCGTGGGATCTGGCCGATATGGTCGGCATGTCGGAAATCTACGGCGTGCTGGAGAACTTCTACACTGCTTACCTCGCGTCTTTGGACCCGAATGGCGGTGGTGGAGGTTCCTCGATCATCATCGATCACATCAACAACAAGAACAACCCTCACCAGGTGACGGCTGCTCAGGCCGGCGCTTACAGCACGCTTCAGATCGACACGATGCTGGGCGGCTATGTCAAGACGACCGGCACTGCTGCGAACTCGACCCAGTTCAACGGGAAGACGTACGCTCAGATGCTCACTGACGTGGCTGGGGTGAAGGTCGCAAACGCTGCCGCCGCAGACAATGCGACGCATGCTGTCACGGCTGATACGGCAACGAACGCCAACGCGCTCGGCAACAAGAGTCTGTCGCAGCTGATGACTGACGTGGCCGCTACGAAAGTCGCAAACGCTGCTCATGCAGACAATGCCGACCATGCAACAAATGCTGACCTGGCGACCAACTCCAACCAGTTGGGTGGTCAGTCGCTGACCCAGGTACTCGCCGCGGCTCAGGCTCAAACGGCTGCAGACTCCGCCAAATTCAACGGCAAGAACTATGCTGATGCAAAGGCAGACATTCTTTCCGGACAGGCAGCAGACTCGGCTCTGTTCAACGGTCAAACGTTGGCAGAGATCATGGCAACACTCCAGCAAGCTACAGGCGACGCCAGCACGCTGAATGGCAAGTCGTATACCGACATCATGGCGGCAGTGAAGACCACCAAGGTCGACAATGCTACCAATGCAGATACGGCAGCCAACGCAACGGCACTCGGCGGCCAGACTCTCTCGCAGATTCTGACGTCGGTGGCAGGTGTGGTTCCTGACCTGGCACACAACTCGGAAGCTGTGTACGGCTACACGTTCGACCAGCTGGTCACCGCTATCGGACAAAGCACGACCTGGGTGAACGGCCTCGACTACCTGTGTGTTGATCTCGATCTGGAACACGCCACGTTGCAGTCGCCGGCGAATGGCGGTACGGTTGACAATTCGTACCACTACCTGTATGTCGGTTCGTTCCCGATTCCGACGACGGGTTCCAGCAACCAGTACTACGACCCGACTCAAGAGCTTTATAGCTCATCGATGGACTTCTTCATCTACGGTCAGTCGAAGACTCAGCGTCTGCGTGCAAACTTGCAGGTAAACGCCGACAACAAGACGATGGGCATCACGTACTACAATGATACCGGACTGGATGTATCGGTTGCGGGTCTGGGCTTCCGCACGGTTGCCAGTACGCTGAAGTCTTCGGATAACTCGCAGACGGCAAACGTCAACGAAGTTTATCTGAAAGTCAAGACGAGCGAAAACGTCCGTCGTGTTGGTATCTTCCAATTCACGAAGAACAGCTTCGTCATCGACGAATCTGAATCGCTGAGTCTCTACGACTCGACGTTCGTGAATCTGAATGGCGTGACCTGGGTCAACCCGAGTCAAACCGCTCAGGAAGCCGCAAACGCTGCTGCTGTTACGGCAGAAGCTTCGGCACGTGGAACTGCTGATGCGGCAATCCGCACGGACACTCAGGCAGCGCTGGACGCACTGGCTGATCAGATCAACTCTCTCACCAGCACTCCGGCTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
090077ebf42c542a6ed5daeef13c5a3b0fe3b84d90fff760da2fe21148a729a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5354
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Optimal preservation method of new biocontrol agent Burkholderia jumbophages having a potential suppressing rice seedling rot disease Kanaizuka,A., Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2022-11-19 — GenBank