Protein

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UniProt accession
A0A291LHF8 [UniProt]
Protein name
RNA ligase 1 and tail fiber attachment catalyst
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MKELYNNLLKLTEEHGDCFFFRDHWSSIGNHFRVFSYHIAGLTQWMLPDALECRGIMFELINGEPYRIASRPMEKFFNLAERQAWNLTNSGVVGLDKLELDYSNIDRYEDKADGSLVSSYHFIDPEDDNRINYMLKSKTSINSDQANDANRWLVNHTDLLDFIIDCEEAGYTVNLEWCSPKNQIVIMYPEESLKILNVRHRDTGEYYSNNKLIRSPVFRKYAVDQFMFEEGTDVNTAISNMYNETGIEGYILVMRDGSRVKIKTTSYVARHKLKDSITNNKDLVIAVAQGVSDDLRQLFLDDSLSLTKIQEFEDHVVSVAGSTYTKIREAHKACAGMERREYAISMQNTFXXXXXHRVRKVAHQSR
Physico‐chemical
properties
protein length:366 AA
molecular weight: 41868,71230 Da
isoelectric point:5,68142
aromaticity:0,10526
hydropathy:-0,49141

Domains

Domains [InterPro]
DC_1201
ATT
1–50
DC_1201 IPR019039 G3DSA:1.10.3550.20
IPR012648
Unmapped
2–351
IPR012648
IPR019039
STR
52–267
IPR019039 IPR049042
A0A291LHF8
1 366
Architecture
ATT
STR
RBD
ATT 1-50 | STR 51-267 | RBD 268-365 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AS-sw
[NCBI] 		2026113 Uroviricota > Caudoviricetes > Pantevenvirales > Emmerichvirinae > Ceceduovirus
Host Aeromonas salmonicida subsp. salmonicida
[NCBI] 		29491 Bacteria > Proteobacteria > Gammaproteobacteria > Aeromonadales > Aeromonadaceae > Aeromonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATI18434.1 [NCBI]
Genbank nucleotide accession
MF498775 [NCBI]
CDS location
range 219533 -> 220633
strand +
CDS
ATGAAAGAACTTTATAACAACCTGTTGAAGCTAACAGAAGAACATGGAGATTGTTTCTTCTTTCGTGACCATTGGTCTTCCATTGGGAACCATTTTCGGGTATTCTCCTATCACATCGCAGGATTAACCCAATGGATGCTCCCAGACGCTCTAGAGTGTCGTGGTATCATGTTCGAGCTGATTAACGGTGAACCGTACCGGATCGCATCTCGACCCATGGAGAAGTTTTTCAACTTGGCAGAACGCCAAGCATGGAACCTAACAAATTCCGGGGTCGTTGGACTCGATAAACTGGAATTGGATTATTCTAATATCGACCGATATGAAGATAAAGCAGATGGTAGTTTGGTGAGTTCTTATCACTTCATCGACCCAGAAGACGACAACCGTATTAATTACATGTTGAAAAGCAAGACCTCAATTAATAGCGATCAGGCAAATGACGCGAATCGTTGGTTGGTGAACCATACAGACCTTTTGGACTTCATTATCGATTGTGAAGAAGCTGGTTATACCGTGAATCTGGAATGGTGTTCTCCAAAGAACCAGATTGTTATTATGTATCCAGAAGAAAGCCTCAAGATCCTGAACGTCCGCCATCGTGATACTGGGGAATATTACTCAAACAACAAGTTGATTCGGTCTCCTGTTTTCCGTAAGTATGCGGTAGACCAGTTCATGTTTGAAGAAGGTACAGATGTTAATACCGCAATTTCAAACATGTACAACGAAACCGGGATCGAAGGTTACATTCTGGTTATGCGAGATGGTAGTCGCGTTAAGATCAAGACCACATCATATGTAGCTCGCCATAAGCTGAAAGACTCTATTACCAACAACAAGGATTTGGTAATTGCAGTTGCTCAAGGTGTGTCAGATGACCTACGTCAACTGTTTTTGGATGATTCGTTATCTCTAACAAAAATCCAAGAATTCGAAGATCATGTGGTTAGTGTTGCTGGTTCAACTTATACCAAGATCCGAGAGGCCCATAAGGCTTGTGCTGGAATGGAACGACGCGAATACGCAATCTCTATGCAGAACACATTCNNNNNNNNNNNNNNNCATAGAGTCAGAAAAGTGGCGCATCAATCTAGATGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0005524 ATP binding Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0046872 metal ion binding Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0003972 RNA ligase (ATP) activity Molecular Function IEA:InterPro (UniProt)

Tertiary structure

PDB ID
b954e871dcd93b8af64aed533a8ea0fa41d8be1c74c87b884bea3ff3a0bc9a8e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8308
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50