Protein

View in Explore
Genbank accession
YP_009140407.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVLKGINFDRSIVTPENEASILDLAMQNRSGVLDGMTIDILNTTSNQLALFHGTAVLQGYGIEITRAANGAPDVLVDTTGQSNETMLLCLTIDLNQVNVPSGTVGTNTYAVDYKQIRLEFLDVPTLLKQYWRDHSLHDLIDPRRVISMPLYWITFGQTGTTPKYEQIKSNYIDGGNSGNPAYGIAARCENFNHFINKVAVQSIPINGVANRPVSSTASQLTNYKVWRNPYLCSQDPRDKFAPDNLVIEEDGIYRIDISGSINIANYTFPASGNSWRVGGRYFQIVCARNSSANNLAEFGAEQHLPPSGVWTRRVLVGEYTAGMTEQAFSSVATISLFKGDNFFLQFETGTNTSRDSAYNNGYGTSGTHLRNFSYTLERVGDLNGTAYYDNGTF
Physico‐chemical
properties
protein length:393 AA
molecular weight: 43380,88810 Da
isoelectric point:5,29850
aromaticity:0,10433
hydropathy:-0,27455

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
1–173
G3DSA:2.60.520.10 G3DSA:2.60.120.1400
G3DSA:2.60.520.10
STR
1–165
G3DSA:2.60.520.10 PF22446
YP_009140407.1
1 393
Architecture
STR
ATT
STR 1-173 | ATT 183-381 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009140407.1
1 393
Domain Start End Length (AA) Confidence
N-terminal 1 149 149 0,9579
Central domain 150 348 200 0,0042
C-terminal 349 393 44 0,9971
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-149
Central
150-348
C-terminal
349-393

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 1358
[NCBI] 		741942 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009140407.1 [NCBI]
Genbank nucleotide accession
NC_027120 [NCBI]
CDS location
range 18503 -> 19684
strand +
CDS
ATGGTACTTAAAGGCATTAACTTCGACCGCTCAATCGTCACACCCGAAAACGAAGCGTCGATTTTAGACCTCGCAATGCAGAACCGCTCGGGCGTACTCGACGGCATGACAATCGACATCTTAAACACAACGTCGAATCAGCTTGCTTTATTTCACGGCACGGCGGTGCTGCAAGGCTACGGCATAGAAATCACGAGGGCGGCGAATGGTGCGCCCGACGTGCTCGTCGACACGACGGGGCAGTCAAACGAGACTATGCTCTTATGTTTGACGATTGACTTGAATCAGGTCAACGTTCCGTCGGGAACGGTTGGAACTAATACGTACGCCGTCGACTATAAACAAATCAGGCTCGAATTTCTCGACGTGCCGACCCTGCTCAAACAATACTGGCGCGACCATAGCTTGCACGACCTAATCGACCCGCGTCGAGTGATAAGCATGCCGCTGTACTGGATAACATTCGGTCAGACAGGAACGACGCCGAAATATGAGCAAATAAAGTCAAATTATATTGACGGCGGGAACTCGGGCAATCCTGCTTACGGAATCGCCGCACGCTGTGAAAACTTCAATCACTTTATAAACAAAGTCGCCGTGCAGTCAATACCGATAAACGGCGTCGCGAATCGCCCCGTCAGCTCGACGGCTTCGCAATTAACGAATTATAAAGTATGGCGTAACCCGTACTTATGCAGTCAAGACCCGCGCGACAAGTTCGCACCGGATAACCTCGTCATCGAGGAAGACGGAATCTATCGAATCGACATAAGCGGCTCGATTAACATTGCAAACTACACTTTCCCCGCGTCGGGTAACTCGTGGCGCGTTGGTGGTCGGTATTTCCAAATAGTATGCGCACGTAACAGCTCGGCGAATAACCTCGCAGAATTCGGAGCAGAGCAGCACTTGCCACCGTCGGGCGTATGGACGCGCCGTGTGTTGGTCGGCGAATATACCGCAGGCATGACAGAGCAAGCCTTTTCATCAGTTGCCACAATTTCACTATTCAAGGGCGATAATTTCTTCCTGCAATTCGAAACAGGCACGAACACCTCGAGAGACAGCGCCTATAATAACGGCTACGGAACAAGTGGCACTCACTTGCGTAATTTCTCTTATACGCTCGAGCGCGTCGGCGACCTTAACGGAACGGCTTATTATGACAATGGCACGTTTTAA

Genome Context

Genome Context

Tertiary structure

1 / 7
PDB ID
Source
Method
Resolution
Oligomeric State