Protein

View in Explore
Genbank accession
YP_007002456.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,57
Protein sequence
MADYSQLPIENIWSTGGDMVAPTPAQQQGGWGIQSVPRQWWNWKWNLHDTNLAYLLQKGIPEWTSTQEYIANKSFCTRNGFVYKAVRTHTGSDPATVSSNWVRAFADFTTASSALGSLTPREGGIPFFISASGAGVFDSTAYGRGMLNVANAAGARNYISAQESSVVLSNLSTVTRAANAVPYFNTDTSMATFNITAFGRGLVNAGDATNARTFLGLANSATITADPANRAHTLVYRDAAGNFNAGVITATLSGNATTASKLRAPVTINGVAFDGSQNIVLPGLDTSYAGVVARLHINGANMTGTDKTTQLALRNKSDTDWISLVTPDDSSVVFQFRGPEAANASVRINSNVVFHAGNQYGLGATQTQARERLLVDRLAQNTSQTVLYNADRSRYFWLQDNGVSGIWDATTNTPLWRFSRLGQLDYGTVPVAQITGLANSATIPASASNLTNQIVVRSGTGDIAVQGVTAFGAVLGTDYIRVRASTGNAHLVFQRNDGAEVGLIWGIPSANSLNFRTAGGATGMSLAGQDLTVVGRVNAATLNSSGNVNSGNSVIAAGNVQAAGRVYCGDAFMSSNGNLTGGAFGSYGTLTNWVDSVYARKTDVMTDAQILAATSRGSAQAVGTYVFAIAASGSGDVGTVVAGTSLRSSSPVKLPAELRYPVATGAWVGSEPEVLTRLPCSRRLQLNKIGP
Physico‐chemical
properties
protein length:691 AA
molecular weight: 72504,85520 Da
isoelectric point:9,10592
aromaticity:0,08394
hydropathy:-0,06223

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage JG004
[NCBI] 		757342 Uroviricota > Caudoviricetes > Vandenendeviridae > Pakpunavirus > Pakpunavirus JG004
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007002456.1 [NCBI]
Genbank nucleotide accession
NC_019450.1 [NCBI]
CDS location
range 45255 -> 47330
strand +
CDS
ATGGCTGATTACAGTCAACTACCTATTGAAAATATTTGGTCCACAGGCGGGGATATGGTAGCCCCGACCCCTGCGCAGCAGCAAGGCGGATGGGGTATTCAGTCGGTTCCTCGCCAATGGTGGAACTGGAAGTGGAACCTTCACGATACTAACCTAGCGTATTTGCTACAGAAGGGCATCCCAGAGTGGACCAGCACTCAAGAGTATATTGCAAACAAATCGTTCTGCACAAGAAACGGTTTCGTCTACAAGGCTGTCCGTACCCATACAGGTAGCGACCCGGCCACCGTTAGTTCTAACTGGGTCCGAGCTTTCGCAGACTTTACCACAGCTAGCTCTGCACTTGGAAGCCTGACTCCGAGAGAAGGAGGGATTCCTTTCTTCATTAGCGCATCTGGTGCAGGTGTGTTTGACTCTACGGCTTATGGACGTGGCATGCTGAACGTAGCCAACGCAGCGGGAGCTAGAAACTACATTTCGGCTCAAGAGAGTTCTGTTGTCCTGTCTAACCTGTCTACTGTGACTAGGGCTGCCAACGCGGTTCCGTACTTCAACACCGACACCTCGATGGCTACCTTCAACATTACAGCGTTCGGAAGAGGCCTAGTCAACGCGGGTGATGCAACTAACGCAAGAACCTTCCTAGGCCTAGCTAACTCTGCTACTATCACGGCTGATCCAGCCAACAGAGCACACACTCTGGTCTATAGAGACGCTGCTGGTAACTTCAACGCTGGTGTGATTACAGCCACTCTTTCTGGTAACGCGACTACAGCCAGCAAGCTCAGGGCTCCAGTTACGATTAACGGCGTAGCGTTCGACGGAAGCCAGAACATTGTTCTGCCGGGCCTAGATACAAGCTACGCCGGGGTTGTAGCGAGGCTCCATATTAATGGAGCTAACATGACCGGAACAGATAAGACTACCCAGCTAGCTCTTAGAAATAAATCCGATACAGATTGGATTAGCTTGGTTACTCCTGATGATAGCTCGGTGGTGTTTCAATTCAGAGGCCCAGAAGCGGCTAATGCCTCTGTGCGGATTAACTCTAATGTCGTATTCCACGCGGGGAACCAGTACGGACTAGGAGCTACTCAAACGCAAGCCAGAGAGCGGCTCTTGGTTGACAGACTGGCACAGAACACGTCTCAAACTGTCCTGTACAACGCGGATAGGAGCAGGTATTTCTGGTTGCAAGATAACGGTGTTTCCGGTATCTGGGACGCAACGACTAACACCCCTCTATGGCGTTTTTCTAGACTAGGCCAGCTCGACTACGGAACAGTCCCTGTTGCACAAATTACAGGATTGGCCAACTCCGCGACAATTCCGGCATCCGCCTCCAATCTGACTAATCAGATTGTTGTGAGGAGCGGAACAGGAGATATCGCAGTACAAGGCGTTACAGCGTTTGGCGCTGTTCTGGGAACAGACTATATTAGAGTAAGAGCCAGCACTGGTAACGCTCACCTAGTATTCCAGAGGAATGATGGAGCAGAGGTAGGGCTTATTTGGGGAATCCCGTCTGCCAACTCTCTGAACTTCAGGACCGCAGGCGGTGCGACAGGCATGTCTCTGGCTGGTCAGGACTTGACTGTAGTTGGCAGGGTGAATGCTGCGACACTCAATTCGTCTGGCAACGTCAACTCTGGCAACAGCGTGATTGCTGCCGGGAACGTGCAGGCTGCTGGCCGTGTGTACTGCGGCGATGCTTTTATGAGCAGCAACGGCAACCTTACTGGCGGAGCTTTCGGCTCTTATGGGACTCTTACCAACTGGGTAGACTCTGTATACGCCAGAAAAACTGACGTAATGACTGATGCCCAAATCTTGGCTGCCACTTCTAGAGGTAGTGCTCAGGCTGTGGGAACATATGTCTTTGCGATTGCAGCTAGCGGAAGTGGGGATGTTGGGACTGTAGTAGCTGGTACGTCTCTAAGGTCTTCGTCTCCCGTCAAACTACCAGCGGAACTACGCTATCCGGTAGCTACAGGTGCATGGGTAGGTTCGGAGCCGGAGGTTCTAACCAGATTACCTTGTTCCAGAAGGTTGCAGCTTAACAAAATAGGCCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
664fa0e21dd9f8431da4b77ac76e33dee47249c62c72d13090e7c7863322601f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6029
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequencing and Characterization of Pseudomonas aeruginosa phage JG004 Garbe,J., Bunk,B., Rohde,M. and Schobert,M. 2011 21569567 GenBank