Protein

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Genbank accession
YP_008060256.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MALTVYPLDAGTVGPTGPEGPQGPKGDKGDTGATGATGATGATGAAGAAGSQMLRGTSAPAAGTGINGDWYCWEDTRTFLGITNTTFTFYRKESGNWVQVGSTVAGAKWYLNNTSTSSADTKPGDMLLRYDNGDIYQRSASGWGTPIGNLKGPKGDTGDTGPQGPQGLPGDGAVNTVNSVSPDVAGNVQLTAANVGALPIAGGTLTGHTEIRPTTGHAISAYGSSDTSTYFRVTDAGHPYSNSKRATFYNMGVGDTTTDFGGGTFVLGVKNASVIPTTTPTNGVQMWSEGGKLKLRGTDGVINTVNDFMPKSGGTFTGDFSLEGTSGSYRQFSLDVGGLKRWTFQKDDVVEPGDGSGSNLRISSRNDDGTFKSTVFFADRGTGQVAIGTTVPYSNTKLSTAGAIGLKDIASDPTTATGGAAIYSKSGLLYVKEGDGTVFQLEDSIPLTQRAAANGVATLDSGTKIPIAQIPDVAASSNFTPESLGVKAWVGPPSDMSSGFTYPGVGTGRMSAIYVNRSMSVSQIVWHFYGYAGGLLTGSWAGIYNTSGTRMAYTGDLSTATYEPEEQHDVGGGWSSSNLTSAVTLAPGIYYVLWRMNYTASPADGPAMGRLENSETTPSRMGISNNIWMHGIYTTSATSAPSTITTANFQRGGTRFWVALA
Physico‐chemical
properties
protein length:661 AA
molecular weight: 68320,50640 Da
isoelectric point:5,38171
aromaticity:0,09077
hydropathy:-0,28805

Domains

Domains [InterPro]
DC_1519
ATT
27–309
DC_1519
DC_1175
STR
302–661
DC_1175
YP_008060256.1
1 661
Architecture
ATT
STR
ATT 27-309 | STR 310-661
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008060256.1
1 661
Domain Start End Length (AA) Confidence
N-terminal 1 242 242 0,7631
Central domain 243 441 200 0,2957
C-terminal 442 661 219 0,9574
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-242
Central
243-441
C-terminal
442-661

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Zemlya
[NCBI] 		1327760 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptomyces lividans
[NCBI] 		1916 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008060256.1 [NCBI]
Genbank nucleotide accession
NC_021339 [NCBI]
CDS location
range 17368 -> 19353
strand +
CDS
GTGGCACTGACTGTCTACCCCCTCGATGCGGGGACCGTTGGCCCGACTGGGCCTGAAGGCCCGCAGGGTCCGAAGGGCGACAAGGGCGACACCGGAGCGACCGGTGCAACCGGCGCGACCGGCGCGACTGGTGCGGCCGGTGCCGCTGGCTCCCAGATGCTTCGAGGCACGTCCGCCCCGGCTGCTGGCACGGGCATCAACGGCGACTGGTACTGCTGGGAGGACACCCGGACCTTCCTCGGCATCACGAACACGACGTTCACGTTCTACCGCAAGGAGTCCGGCAACTGGGTTCAGGTCGGTAGCACAGTCGCTGGCGCGAAGTGGTACCTCAACAACACCTCGACTTCCAGTGCCGACACCAAGCCTGGCGACATGCTGCTCCGTTACGACAACGGTGACATCTACCAGCGCAGCGCCTCGGGCTGGGGTACCCCGATCGGCAACCTGAAGGGGCCGAAGGGCGACACGGGTGACACCGGTCCCCAGGGTCCGCAGGGTCTTCCCGGCGACGGTGCGGTCAACACCGTGAACAGCGTCTCGCCGGACGTGGCCGGTAACGTTCAGCTCACCGCCGCGAACGTCGGTGCCCTCCCGATCGCTGGCGGAACCCTGACCGGTCACACCGAGATCAGGCCCACGACCGGCCACGCCATCTCGGCGTACGGCAGTTCGGACACGTCGACCTACTTCCGGGTCACGGACGCTGGCCACCCGTACTCGAACTCGAAGCGCGCCACGTTCTACAACATGGGCGTCGGCGACACCACCACTGACTTCGGTGGTGGCACGTTCGTCCTCGGTGTCAAGAACGCCTCGGTGATCCCGACGACCACGCCGACGAACGGCGTGCAGATGTGGTCCGAGGGCGGCAAGCTGAAGCTGCGTGGCACGGACGGAGTCATCAACACCGTCAACGACTTCATGCCGAAGTCGGGTGGCACCTTCACGGGCGACTTCAGCCTCGAAGGCACGAGCGGTTCATACCGGCAGTTCAGCCTCGACGTGGGCGGCCTGAAGCGCTGGACCTTCCAGAAGGACGACGTGGTCGAGCCGGGCGACGGCTCGGGCTCGAACCTCCGGATCTCCTCGCGCAACGACGACGGCACCTTCAAGTCGACCGTCTTCTTCGCCGACCGAGGCACTGGCCAGGTCGCGATCGGGACCACGGTTCCGTACTCGAACACGAAGCTCTCGACTGCCGGTGCCATCGGCCTGAAGGACATCGCCTCCGACCCGACCACGGCTACGGGTGGCGCAGCCATCTACTCGAAGTCCGGCCTGCTCTACGTCAAGGAGGGCGACGGCACCGTCTTCCAGCTCGAAGACTCCATCCCCCTGACGCAGCGAGCTGCGGCCAACGGTGTCGCGACGCTCGACTCGGGCACGAAGATCCCGATCGCTCAGATCCCCGACGTGGCCGCCTCCTCCAACTTCACCCCGGAGTCCTTGGGCGTGAAGGCGTGGGTCGGTCCCCCCTCGGACATGTCGTCTGGCTTCACCTACCCCGGCGTGGGCACCGGGCGCATGTCGGCCATCTACGTCAACCGGTCCATGTCGGTGTCGCAGATCGTCTGGCACTTCTACGGCTACGCGGGCGGCCTGCTGACCGGCTCCTGGGCTGGCATCTACAACACGTCCGGGACGCGCATGGCCTACACAGGCGACCTGAGCACAGCGACGTACGAGCCCGAGGAGCAGCACGACGTGGGTGGGGGCTGGTCCTCCTCGAACCTGACCTCGGCCGTCACTCTGGCACCCGGCATCTACTACGTCCTCTGGCGGATGAACTACACCGCCTCCCCGGCGGACGGTCCGGCCATGGGGCGTCTGGAGAACTCCGAGACCACCCCGAGCCGGATGGGCATCAGTAACAACATCTGGATGCACGGCATCTACACGACCTCCGCCACCTCGGCTCCGTCGACCATCACGACCGCCAACTTCCAGCGTGGCGGTACTCGATTCTGGGTGGCGCTGGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f78d298b3da5e9d85d4badd65ffac02f0e52a35ed2287ec9b0c5054f80178ff8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7418
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50