Protein

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Genbank accession
XJP11837.1 [GenBank]
Protein name
EPS depolymerase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MIEVNCFADLRTTKPEKAGALALLARYYDKDSKFRGGGWFIGYPQKDVPADDGGIIAVGKDDKGNPFFWQRVVNDPEEINILHFGGKCDGKTDDSDAYRRNFMWVFNMKDGSDTLGVKLPSGTTVLNPMDFTDLGEIPVFAMYGDTRCLKGWRPRVKVISNQGDKQVIKVKARRTVIQGINWNGQCYPKVDGKKVDVATIAGAVMPEQRSNNQIFFENICAMGQYVGVHCFRAENTGGSALKFQDTIDTSITEIYGSKIFGAVLEAKWSNTKEAGWNHSTAVRLENGNFQYGYGPAVLDMPRMTQAFMKNIWIEHTRFPGNLNDGQWVFEGNSIESSDNPLNLANTRCVINGFYFQGKGTMTLERAKSPDNWLSGYERGNIRTETYGIIMTDACFRPGYYTGYKVTNTTDQDKWFYIGDFSFPKVGQIWQIEFLSNHNAQVPNVKLQQPADMEGMGRRVITMQRCTVPNAKVYADMHCMGKDAIVDVVYQRLWDTHGKVFIKVAAKAGDVIFNLTTTGPTRFEEGICTLYSDGPVECVGELLTEMTTSVEKNLKDYARPQSRFSLHNGLAGIGANEQGVITMQTKEGSAPKDPTKPAGYTTININGVDRLVPYY
Physico‐chemical
properties
protein length:614 AA
molecular weight: 68592,99120 Da
isoelectric point:7,05192
aromaticity:0,10912
hydropathy:-0,41612

Domains

Domains [InterPro]
DC_0717
ATT
1–115
DC_0717
IPR059934
RBD
4–73
IPR059934 DC_0716
XJP11837.1
1 614
Architecture
ATT
STR
ATT 1-115 | STR 116-614
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XJP11837.1
1 614
Domain Start End Length (AA) Confidence
N-terminal 1 94 94 0,9834
Central domain 95 427 334 0,9735
C-terminal 428 614 186 0,9513
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-94
Central
95-427
C-terminal
428-614

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage phB78
[NCBI] 		3236633 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XJP11837.1 [NCBI]
Genbank nucleotide accession
PP942979 [NCBI]
CDS location
range 206166 -> 208010
strand +
CDS
ATGATTGAAGTAAACTGCTTTGCTGATCTGCGTACAACCAAACCTGAGAAAGCTGGCGCTCTGGCTTTACTAGCTCGCTACTACGACAAAGACAGTAAGTTCCGTGGTGGTGGTTGGTTCATCGGTTACCCTCAGAAAGACGTTCCGGCAGACGATGGTGGTATCATCGCTGTAGGTAAAGACGACAAAGGCAACCCGTTTTTCTGGCAGCGCGTTGTCAATGACCCTGAAGAGATCAACATTCTTCACTTCGGTGGTAAGTGTGACGGCAAGACAGATGACAGTGATGCGTATCGCCGCAACTTCATGTGGGTGTTCAATATGAAAGACGGTAGTGACACGCTGGGTGTTAAGCTGCCGTCAGGTACAACTGTTCTCAATCCGATGGACTTCACTGACTTGGGTGAGATTCCGGTATTCGCCATGTACGGCGATACTCGCTGTCTTAAAGGCTGGCGCCCTCGTGTCAAGGTCATTAGTAATCAGGGCGACAAGCAGGTAATCAAAGTCAAGGCGCGCCGCACCGTAATTCAAGGCATCAACTGGAACGGTCAGTGCTATCCAAAAGTTGACGGCAAGAAGGTTGACGTGGCGACCATTGCTGGTGCAGTAATGCCTGAGCAACGTAGCAACAACCAAATCTTCTTTGAGAACATCTGTGCGATGGGTCAGTACGTAGGTGTTCACTGTTTCCGCGCAGAGAACACTGGCGGCTCTGCACTCAAATTTCAGGACACTATCGACACGTCAATCACTGAGATCTATGGCTCGAAAATCTTCGGTGCTGTGCTTGAAGCCAAGTGGTCTAACACGAAAGAAGCAGGCTGGAACCACTCTACTGCTGTACGCCTTGAGAACGGTAACTTCCAGTACGGCTACGGTCCTGCTGTACTCGATATGCCACGCATGACTCAAGCGTTCATGAAGAACATCTGGATTGAGCATACGCGCTTCCCCGGTAATCTGAATGACGGTCAGTGGGTATTCGAAGGCAACTCTATCGAAAGCTCTGACAACCCTCTGAATCTCGCCAACACTCGTTGCGTTATTAACGGCTTCTACTTCCAGGGCAAAGGCACCATGACTCTGGAACGCGCTAAGAGTCCTGATAACTGGCTGTCAGGCTACGAGCGCGGTAACATCCGAACTGAGACCTACGGCATCATCATGACCGATGCGTGTTTCCGTCCGGGTTACTACACTGGCTATAAAGTAACGAACACAACTGATCAGGACAAGTGGTTCTATATCGGTGACTTCTCGTTCCCTAAAGTCGGCCAGATTTGGCAGATCGAGTTCCTGTCTAATCACAACGCTCAGGTACCTAACGTCAAGCTGCAACAACCAGCAGACATGGAAGGTATGGGCCGTCGTGTTATTACTATGCAACGCTGCACGGTGCCTAATGCGAAGGTCTATGCCGATATGCACTGCATGGGCAAAGATGCAATTGTCGATGTTGTGTACCAGCGCCTGTGGGATACTCATGGTAAGGTGTTTATCAAAGTCGCAGCCAAAGCAGGCGATGTGATTTTCAACCTGACCACTACCGGTCCGACTCGTTTCGAAGAAGGCATCTGTACCCTTTACTCTGATGGTCCTGTTGAGTGCGTTGGTGAGCTACTGACAGAAATGACCACCAGCGTTGAAAAGAACCTGAAAGACTATGCTCGCCCTCAATCTCGTTTCAGTCTGCATAACGGACTGGCGGGCATTGGCGCAAACGAGCAAGGCGTCATCACAATGCAGACCAAAGAAGGCTCTGCTCCTAAAGACCCTACCAAGCCTGCAGGCTATACGACAATCAACATCAACGGTGTTGATCGACTCGTTCCCTACTATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4e3524228b787efee7fd93bdc8c89c0bec1925ec4f6c10b837998d8b9081ce80
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6578
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage phB78 Yang,L.Y., Zheng,Y.Y. and Cui,B.M. 2013-12-26 — GenBank