Protein

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Genbank accession
YP_008433585.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MKLVPLRRKGIPARSAVAGFRDGKAYYGDYEVTRVAENNYAAQQDFRWRVRDNLLLESESSSCFQRIAGRPDIIDYAPIGTLRGVRNMLFTSQLGVTAGKKFYFSKGFLVSEDNKIRLNAVHVSGSTTTQFSDLTYNHGEFLFETVDYFCMRLIRGPREFSNNANSTYLVMVSKRPFDLANVYVASGVVDFVYLGKNRATSADGRHTLLMLASGLATESGNAVLHSTTLTKIAEATVISLENENAPSVAASWKYLITGRTIGGGRVGSTLDLTKFTPTFVRDMVEYDNDGFIKRIAYVGHVPELGAEQWNYTGSSQPVTFQETLGVNHLEFSTRGDDSAPYITVAYQPIPLSAAMLAATPSIIATDSTHQFVTLATLAAWKHGSKFYVAAYGSMGMAKYLRRYAAQAPVYPLTVFSYDVDAANVLSNRQVHEFPVDGGVQAQLGTYLVSADGGYVWFPSHSNGSVVCLDVTGATPQLHAASIGGTYFQFMGVHGDQFMGLQDNVPYMMRPTPDATFTMTFDKTEYLRGESGVLSVSASSDCIVKVRLFGCVTQQRETELDVVLTADTPELISVLVNSDPIAQIIEVE
Physico‐chemical
properties
protein length:587 AA
molecular weight: 64328,97470 Da
isoelectric point:5,88405
aromaticity:0,10733
hydropathy:-0,05792

Domains

Domains [InterPro]
IPR011048
STR
375–493
IPR011048
IPR011048
STR
381–493
IPR011048
YP_008433585.1
1 587
Architecture
STR
STR 375-493 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008433585.1
1 587
Domain Start End Length (AA) Confidence
N-terminal 1 235 235 0,0902
Central domain 236 434 200 0,3127
C-terminal 435 587 152 0,8856
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-235
Central
236-434
C-terminal
435-587

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaBG
[NCBI] 		1335230 Uroviricota > Caudoviricetes > Baikalvirus >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008433585.1 [NCBI]
Genbank nucleotide accession
NC_022096 [NCBI]
CDS location
range 215470 -> 217233
strand +
CDS
ATGAAACTCGTTCCGTTGCGGCGCAAAGGAATTCCGGCGCGCAGCGCAGTCGCAGGCTTTCGCGACGGCAAAGCGTACTACGGAGATTACGAGGTAACCCGCGTGGCTGAAAACAACTACGCAGCCCAACAAGATTTTCGCTGGCGAGTCCGCGACAATCTGCTGTTGGAGTCTGAGAGTTCCTCCTGCTTTCAGCGTATCGCTGGTCGTCCTGACATCATTGATTACGCACCTATCGGCACCCTCCGTGGAGTGCGCAACATGCTGTTCACTTCGCAGCTTGGGGTTACCGCTGGAAAGAAGTTCTATTTCAGTAAGGGCTTTCTGGTAAGCGAGGACAACAAGATTCGACTGAACGCTGTCCATGTGTCTGGAAGCACTACCACGCAGTTCTCGGACCTGACGTATAACCATGGGGAGTTCCTGTTCGAGACAGTCGATTACTTCTGCATGCGGTTAATCAGAGGTCCACGCGAGTTCTCCAACAACGCAAACTCTACCTATCTTGTCATGGTGTCTAAGCGCCCGTTCGATTTGGCGAACGTGTACGTTGCAAGTGGCGTTGTGGATTTTGTCTACTTGGGTAAAAATCGCGCCACGTCTGCGGATGGTCGGCACACTCTGTTGATGTTGGCTTCAGGTCTTGCTACGGAATCCGGCAACGCTGTCCTACATTCAACAACGCTGACCAAAATCGCCGAAGCTACCGTGATCAGCTTGGAGAACGAGAATGCCCCATCCGTCGCTGCCTCATGGAAGTACCTGATCACTGGACGTACTATCGGCGGTGGGCGCGTAGGTTCGACACTAGACTTGACCAAGTTTACACCGACCTTCGTGCGAGACATGGTTGAGTACGACAACGATGGCTTCATCAAGCGGATTGCCTACGTTGGACACGTACCAGAGCTCGGTGCCGAGCAGTGGAACTATACGGGATCGTCGCAGCCCGTGACTTTTCAAGAGACACTTGGCGTCAACCACTTAGAGTTCTCCACTCGAGGCGATGACTCCGCACCGTACATCACTGTGGCGTATCAGCCAATACCTCTGTCTGCTGCGATGTTGGCAGCGACACCGTCAATCATAGCTACCGACAGTACGCATCAGTTCGTGACGTTGGCGACATTAGCGGCTTGGAAGCACGGCTCTAAGTTTTACGTGGCTGCATACGGTTCTATGGGTATGGCAAAATACCTACGCCGCTACGCAGCACAGGCTCCAGTATATCCGCTGACTGTGTTCTCTTACGATGTGGATGCCGCGAACGTGCTGTCCAACAGACAAGTCCACGAGTTCCCGGTCGATGGTGGCGTACAAGCGCAATTGGGTACGTACCTGGTTTCGGCAGATGGTGGTTACGTTTGGTTCCCTAGCCACAGTAACGGTAGCGTTGTGTGTCTTGACGTAACTGGCGCAACCCCGCAACTGCACGCTGCCTCGATCGGAGGAACGTACTTCCAATTCATGGGAGTTCACGGCGATCAATTTATGGGCCTACAGGACAACGTGCCGTACATGATGCGCCCAACCCCAGACGCGACGTTCACGATGACATTCGACAAGACGGAGTACCTAAGAGGAGAATCTGGTGTTCTGTCAGTTTCGGCATCCAGTGATTGCATCGTGAAGGTGCGTCTTTTCGGCTGCGTGACCCAGCAACGTGAAACGGAATTGGATGTTGTCTTGACCGCGGACACACCAGAACTCATAAGCGTGCTGGTGAACTCTGACCCGATCGCACAAATCATTGAAGTGGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a4af1dabbcc8df396e45cb4b22f8006a327b816cdc0ed00686e3209c2b0314b2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4067
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50