Protein

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Genbank accession
URG13144.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,97
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRVLFTKDDQGNIIDLGFAKGGSIDGNVIHIGNYNQTGDYTLNGTFTQIGDFNLKGIARVTRDIIAAGQIMTHGGELITKSSGTAHVRFHDLADRERGIIFSPANDGLTTQVLNIRVQDYKAGSESTFAFNGNGLFSSPEVFGWKSVSTPVIYTNKVITNGKKTGDYDISSLANNTPFEEGETAINHLRVMRNAVGAGIFHEVNVNDGITWYSGDGLDTYLWSFNWAGGLKAGHSISVGLPGGSKGYSELGTASISLGDNDTGLKWHQDGYYFSVNNGTKTFLFSPSETTSLRKFVAGYSTNGTDLTTPPTENYALATVVTYHDNNAFGDGQTLLGYYQGGNYHHYFRGKGTTNINTHGGLLVTPGNIDVIGGSVNIDGRNNASTVLFKGNTIGYSSVDNIELKVWGDTFTTVGGTRKNVMEISDATSWMSYIQRTTAGKVESVINGTQIVNENLTVVKNATFDGTISAAGEIATNAVNGLRIWNADYGAIFRRSEGSLHIIPTAYGEGKHGDIGPLRPFSMALDTGKVTIPDLQSSYNTFAANGYIKFGGHGAGAGGYDIQYAQAAPVFQEIDDDAVSKYYPIVKQKFLNGKCVWSLGTEINSGTFVIHHLKEDGSQGHTSRFNQDGTVNFPDNVSVGGGEATIARNGNIWSDIWKPFTSAGDTTNIRDAIATRVSKEGDTMTGRLTLSAGNDALVLTAGVGASSHIRSDVGGTNNWYIGKGGGDNGLGFYSYITQGGVYITNNGEIALSPQGQGTFNFNRDRLFINGSVWTSHQAGDWGNQWRQEAPVFVDFGYVGNDSYYPIIKGKSVITNEGYVSGVDFGMRRIPNNWAQGIIRVGNQENGHDPQAIYEFHHNGVMYVPNMVKTGRLSAGGGDPVWGGACLAIGDNDTGLVHGGDGRINMFADGVHIASWGSQRLAHEGLWDSYGAFWTEAGKAIVSHGHLVQANDSYSTFVRDVYVRSDIRVKKDLVKFENASQKLSKINGYTYMQKRGLDEEGNQKWEPNAGLIAQEVQAILPELVEGDPDGEALLRLNYNGVIGLNTAAINEHTAEIAELKSEIEELKALVKSLLK
Physico‐chemical
properties
protein length:1107 AA
molecular weight: 119239,82030 Da
isoelectric point:5,73661
aromaticity:0,09846
hydropathy:-0,31879

Domains

Domains [InterPro]
DC_0538
STR
1–691
DC_0538 G3DSA:6.20.80.10 IPR030392
IPR048390
ATT
449–554
IPR048390 DC_0339 Coil
IPR030392
CHP
997–1056
IPR030392
DC_2320
RBD
1024–1107
DC_2320
URG13144.1
1 1107
Architecture
STR
ATT
STR
RBD
STR 1-448 | ATT 449-554 | STR 555-1045 | RBD 1046-1107
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG13144.1
1 1107
Domain Start End Length (AA) Confidence
N-terminal 1 472 472 0,1208
Central domain 473 702 231 0,3517
C-terminal 703 1107 404 0,8111
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-472
Central
473-702
C-terminal
703-1107

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_CE1
[NCBI] 		2945954 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG13144.1 [NCBI]
Genbank nucleotide accession
ON229909.1 [NCBI]
CDS location
range 3604 -> 6927
strand -
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACTGCAGGAGCACGTCCTGCCGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGACCGTGTACTTTTTACTAAAGATGACCAAGGAAATATTATTGATCTGGGTTTTGCTAAGGGCGGTAGTATTGACGGGAATGTTATTCATATAGGAAATTATAATCAAACTGGTGATTATACTTTAAATGGCACCTTCACTCAAATTGGCGATTTCAATCTCAAGGGTATTGCTCGCGTAACTCGTGATATTATTGCTGCGGGTCAGATAATGACCCATGGTGGCGAACTTATTACAAAAAGTTCAGGTACAGCACATGTTCGTTTTCATGATTTAGCTGACCGTGAACGTGGAATCATTTTTTCTCCTGCTAATGATGGATTAACTACACAAGTTCTTAATATTAGAGTTCAAGATTACAAAGCTGGTTCAGAAAGCACTTTCGCTTTTAATGGAAATGGTTTGTTTTCTTCACCAGAAGTTTTTGGGTGGAAATCTGTATCAACTCCGGTAATTTATACCAATAAAGTTATTACAAATGGGAAGAAGACGGGCGATTATGATATATCTTCATTAGCAAATAATACTCCATTTGAAGAAGGCGAAACGGCTATTAACCACCTCCGTGTTATGCGAAATGCTGTAGGAGCAGGTATTTTCCACGAAGTTAATGTTAATGACGGAATAACCTGGTATTCCGGAGATGGCTTAGACACTTATCTTTGGTCGTTTAACTGGGCCGGTGGATTGAAAGCCGGTCATTCTATTTCTGTAGGTCTTCCAGGTGGTTCTAAAGGATACTCTGAATTAGGGACTGCTTCAATTTCTCTTGGCGATAATGATACCGGGCTAAAATGGCATCAGGATGGATATTATTTCAGCGTCAATAATGGAACGAAAACATTTTTATTTAGCCCTAGCGAAACAACTAGCCTAAGAAAATTTGTAGCTGGATATTCTACTAATGGAACAGATTTAACTACTCCTCCGACTGAAAACTATGCTCTTGCTACTGTCGTGACATATCACGATAATAACGCGTTTGGAGATGGTCAGACTCTTTTAGGATATTACCAAGGCGGTAATTATCATCATTATTTCCGCGGTAAGGGTACTACAAACATTAATACTCACGGCGGTTTATTAGTCACTCCTGGTAATATTGACGTTATTGGTGGTTCTGTTAATATCGATGGTAGAAATAATGCTTCAACTGTGCTTTTTAAAGGAAATACTATAGGATATAGTTCAGTTGATAATATAGAGCTCAAAGTTTGGGGTGACACTTTTACTACGGTAGGTGGTACTCGTAAAAATGTCATGGAAATTTCTGACGCAACTAGTTGGATGAGCTATATTCAACGAACAACTGCAGGTAAAGTCGAATCGGTTATAAATGGCACCCAGATTGTTAATGAAAACTTGACAGTAGTAAAAAATGCTACATTTGACGGTACAATCAGCGCAGCCGGTGAAATCGCGACAAATGCTGTAAATGGTCTTCGCATTTGGAATGCAGATTATGGAGCTATTTTTAGACGTTCAGAAGGCAGTCTTCATATTATTCCAACTGCTTACGGTGAAGGTAAACATGGCGATATCGGTCCACTTCGCCCGTTTAGTATGGCTTTAGATACCGGTAAAGTTACTATTCCAGATTTACAATCAAGTTACAATACGTTCGCTGCGAACGGCTATATTAAATTCGGTGGACATGGTGCAGGTGCAGGCGGTTACGATATTCAATATGCACAAGCAGCTCCTGTTTTCCAAGAAATTGATGATGACGCGGTAAGTAAATATTATCCTATTGTTAAACAGAAATTCTTAAACGGTAAATGCGTTTGGTCTTTAGGTACTGAAATTAATTCGGGTACATTCGTTATTCATCATCTGAAAGAAGATGGTTCACAAGGCCATACGTCTCGTTTTAATCAAGACGGTACTGTTAACTTCCCAGATAACGTTTCTGTCGGCGGAGGTGAAGCTACTATTGCTCGCAATGGTAACATCTGGTCTGATATCTGGAAACCGTTTACTTCTGCTGGTGATACTACAAATATTCGTGATGCTATTGCGACTCGTGTTTCGAAAGAAGGCGATACAATGACCGGTAGGTTGACTTTATCTGCTGGAAATGATGCCCTTGTTTTAACTGCAGGCGTGGGCGCTTCATCGCACATCCGTAGTGATGTAGGTGGTACAAATAATTGGTATATAGGCAAAGGCGGCGGCGATAATGGTCTAGGTTTTTACAGTTACATTACACAAGGCGGTGTATACATAACAAATAACGGCGAAATAGCGCTTTCTCCTCAAGGTCAAGGAACATTTAATTTTAATAGGGACCGACTTTTTATTAATGGCTCTGTCTGGACCAGTCACCAGGCTGGCGATTGGGGAAATCAATGGCGTCAAGAAGCTCCCGTATTTGTGGATTTTGGCTACGTCGGTAATGATAGTTATTATCCTATTATTAAAGGAAAATCTGTTATTACGAATGAAGGATACGTATCTGGTGTTGATTTCGGTATGCGACGCATTCCTAATAACTGGGCACAAGGTATTATTCGTGTAGGTAACCAGGAAAATGGCCATGACCCACAAGCTATCTATGAATTCCACCACAATGGAGTTATGTATGTTCCTAACATGGTTAAAACTGGAAGATTATCAGCTGGCGGTGGTGACCCTGTATGGGGCGGCGCGTGTCTTGCTATTGGTGATAATGATACAGGATTAGTTCATGGTGGTGATGGTCGTATTAACATGTTTGCCGATGGTGTTCATATTGCGTCATGGGGGTCTCAACGTCTGGCACATGAGGGGTTATGGGATTCATACGGTGCTTTTTGGACAGAAGCCGGTAAAGCAATTGTTTCTCATGGGCATCTCGTTCAGGCAAATGATAGCTATTCAACGTTTGTCCGTGATGTTTATGTCCGTTCTGATATTCGCGTTAAAAAAGACCTCGTTAAATTTGAAAATGCTTCTCAGAAGCTTTCTAAAATTAACGGTTACACTTATATGCAGAAGCGAGGCCTAGATGAAGAAGGCAATCAGAAATGGGAACCTAACGCCGGTTTGATAGCTCAAGAAGTTCAAGCTATTTTGCCAGAATTAGTTGAAGGTGACCCTGATGGCGAAGCTTTACTTCGTTTGAACTATAACGGTGTAATTGGTTTAAATACAGCCGCAATCAATGAGCATACTGCAGAAATTGCAGAACTTAAATCAGAAATCGAAGAACTTAAAGCATTAGTTAAATCGTTGTTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7f2c3107fcf91813f510523051e30695dd123f29a37f4e06c158b37394817d95
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5202
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50