Protein

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Genbank accession
YP_009147879.1 [GenBank]
Protein name
virion protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSKINRTVLHESVPTIQEFSLGGTVRTRFDLFRDSDYRIWQYLGDVPFLVPPLSTPTSTGGILSSSNKDGKWVDTGATVLEDKLKSPEGYKLIGGLSGKLMSFDISTLVDTPNSAALNSIFKRFRDERIELYSSKPITFIIDEDVTMYGNCDLSNCVFNLKGGKVNYEDERYNYTTVASVHGYPLKELSKNLDIMDYSDELSNCLVKITSKEVDLYRYLNGVYTPKYKGEVNFHTKNGELLYSLKNTYNSPVVCTFIKLPSTRNVVKLPEFTGTVTRWAFNVRRSLVDVYCTYNNTLVQVPDNQSILSSGDTYGVNWCVQMSGIEQSSNNSRYSVLMEYVLKHTFTNSFCGLGWRAIDGNYCRDVSLYNCHMDVVAFHYGSSKITIQDSVVKSSSFGTGAHDESISIINSTIQRTGIRTDYGELKGTFDIIGSTVDVPAGRGVHGFFVCYPSNVSTSSKQPRQLFLPEGVRVQAVFKWGEGTTLNLVEFKNNYIESSTGDTFRMPTVIDFTGSVFLGLDSTFTFSTSTSTGTCIVLKPSFSSALFKVTLGVNGGKCLYNFQSNVDTSFSTPVYGDSECSITVQGGTVRGLVLTSGGVGTFKGTLSMSNTRYIVPENGGHNLHTTGWTFYNQVTFDGTEYTKKNGSKPIINVWGNSVVGNIAISAKSTDSRDVLDGKTLVCPREGEAGNF
Physico‐chemical
properties
protein length:689 AA
molecular weight: 76025,66340 Da
isoelectric point:6,57442
aromaticity:0,11030
hydropathy:-0,21480

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
13–87
G3DSA:2.10.10.80
DC_0352
STR
20–683
DC_0352
YP_009147879.1
1 689
Architecture
ATT
STR
ATT 13-87 | STR 88-683 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009147879.1
1 689
Domain Start End Length (AA) Confidence
N-terminal 1 114 114 0,9890
Central domain 115 632 519 0,9766
C-terminal 633 689 56 0,6491
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-114
Central
115-632
C-terminal
633-689

Taxonomy

  Name Taxonomy ID Lineage
Phage Proteus phage PM16
[NCBI] 		1357704 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Novosibovirus
Host Proteus mirabilis
[NCBI] 		584 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009147879.1 [NCBI]
Genbank nucleotide accession
NC_027342 [NCBI]
CDS location
range 38708 -> 40777
strand +
CDS
ATGAGTAAGATTAATAGAACAGTACTACATGAGTCAGTACCTACTATACAAGAGTTTTCTTTAGGGGGTACTGTAAGAACCCGTTTTGATTTATTCAGAGATAGTGACTACCGTATATGGCAGTACTTGGGAGACGTACCTTTTCTAGTACCTCCTTTATCAACACCTACGAGCACAGGAGGTATCCTTAGTAGCAGTAATAAAGATGGGAAGTGGGTGGATACTGGTGCTACTGTACTAGAAGACAAGCTAAAATCCCCAGAAGGTTACAAATTAATTGGTGGTTTATCTGGAAAATTAATGTCTTTTGATATATCTACACTAGTGGATACACCTAATAGTGCTGCTTTGAATTCCATTTTTAAACGATTTAGAGATGAGAGGATAGAACTGTACTCAAGTAAGCCAATTACCTTTATAATAGATGAGGATGTTACTATGTATGGTAATTGTGACTTGAGTAATTGCGTATTCAATTTAAAAGGTGGTAAGGTTAACTATGAAGATGAGAGGTACAACTACACTACCGTAGCTAGTGTACATGGATATCCACTCAAAGAACTTAGTAAAAATCTAGATATTATGGACTACTCAGATGAATTGAGTAATTGTTTAGTGAAGATAACATCTAAAGAAGTAGATTTATACCGATACTTAAACGGGGTGTACACTCCTAAATATAAAGGTGAGGTTAATTTCCACACTAAAAATGGAGAGTTGTTGTACTCTTTAAAGAATACATACAATTCTCCTGTGGTATGTACTTTTATAAAGCTCCCCAGTACTCGAAACGTAGTTAAATTACCTGAATTTACAGGGACAGTTACTAGATGGGCTTTTAATGTTCGACGCTCCTTAGTGGATGTGTATTGCACATACAATAACACTTTAGTACAAGTGCCTGATAATCAATCTATACTAAGTTCAGGTGACACTTATGGTGTTAACTGGTGTGTGCAGATGTCCGGTATAGAACAGTCTAGTAATAACTCTAGGTATTCTGTGTTAATGGAGTACGTACTAAAACACACTTTCACTAATAGTTTCTGTGGTTTGGGTTGGAGAGCTATCGATGGTAATTATTGTAGAGATGTATCCCTATATAATTGCCATATGGATGTAGTAGCATTTCATTATGGTAGTTCTAAGATTACCATACAAGATAGTGTGGTTAAATCATCCTCTTTTGGTACAGGCGCTCATGATGAGAGTATTAGTATCATAAACAGTACTATACAGAGGACTGGTATTAGAACTGACTATGGGGAGCTAAAGGGGACATTTGATATAATAGGTTCTACAGTGGATGTCCCTGCAGGTCGTGGGGTACATGGTTTCTTTGTGTGTTACCCTAGTAATGTTAGTACTAGTAGTAAACAGCCCAGACAACTATTCTTACCAGAGGGTGTTCGTGTACAGGCTGTGTTTAAATGGGGTGAGGGTACTACCTTAAATCTCGTGGAGTTCAAAAATAATTATATTGAGTCTAGCACAGGGGATACATTTAGAATGCCGACAGTGATAGATTTTACTGGCAGTGTGTTCTTGGGTTTAGATAGTACTTTTACTTTTAGTACATCCACAAGCACTGGTACTTGTATTGTACTAAAACCTTCCTTCTCTAGTGCATTATTTAAAGTAACACTGGGTGTGAATGGTGGGAAGTGTCTTTATAACTTTCAAAGTAACGTAGATACTTCATTTAGTACTCCCGTGTACGGGGACTCTGAATGTTCTATAACAGTACAAGGTGGTACTGTTAGGGGTTTAGTCCTAACATCAGGTGGGGTTGGTACCTTCAAGGGTACTCTTAGTATGAGTAACACTAGGTACATTGTACCTGAAAATGGGGGGCATAATTTACACACTACTGGATGGACATTCTACAATCAAGTTACATTTGATGGTACTGAGTACACTAAAAAGAACGGGTCTAAACCTATTATTAATGTGTGGGGTAATTCTGTTGTGGGGAATATAGCGATCTCAGCTAAGAGTACAGACTCAAGGGATGTCCTAGATGGTAAAACTCTAGTATGTCCTAGGGAGGGAGAGGCTGGTAATTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee63f767ab6eb147adbcf16ba12666fe5bffd7ae41958320f57a6235f3cea852
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5957
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50