Protein

View in Explore
Genbank accession
AUR89144.1 [GenBank]
Protein name
coil containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MKKTILAMAIALTMTAPVMAAKTINLNGEQSVIRTGTAGGVEKENGKIHSGSVGIDYKTGQIWIQTGDDNASVFKEDGDRQEVGRFVTENDLQAMVDGITGDTTISYAGDQVNNYGDDVTIMGHVCNQSGSYEGNTCNVNIDSVKGDLVLNGVEVDLDDLKGADGKDGVKGDKGEQGTQGVAGQDGKDGVKGAKGDTGTNGKDGKDGVTTFVNKYDKDQVDADFVSEEELQAVKDRIEEVNVEDQRVVSGELNGDGKLVLTNADMDGGGKNDVVIDVSGLDQSEEVAKVQEQLDNTVDVWTDSEGNGYGATLTDSEGNTVQVAGYDDVAANREAINNTHNQINGEGGIVDQIADLEDTKADKDQVTADINDAKDAAVSESNSYTDSALADAKTEQAGVDSTQNDKIAEVEKESKDRDAALSGEISRVELEYTQRDNELQKSIDSNTSAIESTNDRINTVVADQAITDNKQDTAIQDNKREIEDNTQRINGVHTASVERDEALQNQVDEVKQVNVDQGIAINDNRENIINNTVEIRKTQQQVSVNASGIAANLIAISNNAAHNEKQDNRMSVIEEELYTTTARSVKNEQRIGKLEYQVQDLYQANERQDGMIAGVLAASTFEMPLQWDGSWAMQGAIGHYNGQNALALGAVHAGEGYAVRMAITGSDADDFSKLGYAASVTISTSLFK
Physico‐chemical
properties
protein length:687 AA
molecular weight: 73495,83270 Da
isoelectric point:4,27483
aromaticity:0,03785
hydropathy:-0,63057

Domains

Domains [InterPro]
IPR008160
STR
162–207
IPR008160 Coil G3DSA:3.30.1300.30
IPR008160
STR
162–205
IPR008160 DC_2126 G3DSA:3.30.1300.30
IPR045584
RBD
597–667
IPR045584
AUR89144.1
1 687
Architecture
STR
RBD
STR 162-585 | RBD 586-682 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.121.O._10N.286.46.C4
[NCBI] 		2070726 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterovibrio norvegicus
[NCBI] 		188144 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR89144.1 [NCBI]
Genbank nucleotide accession
MG592495 [NCBI]
CDS location
range 76117 -> 78180
strand +
CDS
ATGAAAAAGACAATTCTAGCTATGGCAATCGCACTTACAATGACCGCTCCTGTTATGGCTGCAAAAACTATCAACCTTAATGGAGAGCAGTCGGTAATTCGCACAGGTACTGCTGGTGGTGTTGAGAAGGAAAACGGTAAGATCCATAGTGGTTCGGTGGGTATTGATTACAAGACTGGTCAAATTTGGATTCAAACGGGTGACGATAACGCTTCTGTATTCAAAGAAGATGGTGATCGCCAAGAAGTTGGTCGTTTTGTTACTGAGAACGACTTACAAGCAATGGTTGATGGCATTACTGGCGATACTACTATTAGCTATGCTGGTGATCAAGTTAATAACTATGGTGATGATGTTACTATTATGGGTCATGTGTGTAACCAATCAGGTTCATATGAAGGTAACACTTGTAACGTTAACATTGATTCGGTTAAGGGTGACTTGGTTCTTAACGGTGTCGAAGTTGACTTGGATGATCTTAAAGGTGCTGATGGTAAAGATGGCGTTAAAGGTGATAAGGGTGAACAAGGTACCCAAGGTGTTGCAGGGCAGGATGGTAAAGATGGTGTGAAAGGTGCCAAGGGAGATACGGGTACTAATGGTAAAGATGGTAAAGATGGTGTCACCACCTTTGTAAACAAATACGACAAAGACCAAGTAGACGCGGATTTCGTATCTGAAGAAGAACTTCAAGCTGTAAAAGACCGTATCGAAGAAGTTAACGTAGAAGACCAGCGAGTAGTTTCAGGTGAACTTAACGGAGACGGAAAGCTAGTATTGACAAACGCTGATATGGACGGTGGCGGTAAAAACGACGTAGTTATCGATGTATCAGGTCTTGACCAATCGGAAGAGGTAGCTAAGGTACAAGAACAACTAGATAATACGGTAGATGTATGGACAGATTCAGAGGGTAACGGCTACGGTGCAACCCTTACTGATTCAGAAGGTAATACTGTACAGGTAGCAGGTTACGACGATGTAGCTGCAAACCGTGAAGCAATCAATAATACCCATAACCAAATTAACGGTGAAGGTGGTATTGTTGACCAGATTGCAGACCTAGAAGATACCAAGGCAGATAAAGATCAAGTTACTGCTGACATCAACGATGCTAAAGACGCGGCTGTGTCCGAGTCAAATTCTTACACGGATAGTGCACTTGCAGATGCTAAGACGGAACAAGCTGGAGTAGATTCAACCCAGAATGATAAGATTGCTGAGGTGGAGAAAGAAAGTAAAGACCGTGATGCAGCCCTCTCTGGCGAGATTAGTCGAGTAGAGCTAGAATATACTCAACGTGATAATGAACTACAAAAATCTATTGACAGCAATACTTCTGCGATTGAGTCTACAAATGACCGAATCAACACTGTAGTAGCTGACCAAGCGATCACAGACAATAAACAAGATACAGCTATCCAAGATAACAAACGTGAAATCGAAGATAATACTCAACGTATCAATGGTGTACATACAGCCTCTGTCGAGCGTGATGAAGCTTTGCAAAACCAAGTAGATGAAGTTAAGCAGGTGAATGTTGATCAAGGTATCGCTATCAACGACAACCGTGAAAACATCATTAATAACACTGTAGAGATTCGTAAAACCCAACAGCAAGTGAGTGTTAACGCGTCAGGTATTGCAGCTAACTTGATTGCAATCTCTAACAACGCAGCGCATAATGAGAAACAAGACAACCGTATGTCTGTAATTGAAGAAGAGTTGTACACAACCACTGCACGTAGTGTCAAGAATGAGCAACGTATCGGTAAGCTTGAGTACCAAGTACAAGACCTTTACCAAGCTAACGAGCGTCAAGACGGTATGATTGCAGGTGTACTAGCAGCCTCTACCTTCGAGATGCCTCTTCAATGGGATGGTTCGTGGGCTATGCAAGGTGCGATTGGTCACTACAACGGTCAGAACGCTCTAGCCCTAGGTGCTGTACATGCAGGTGAAGGTTACGCGGTACGAATGGCGATTACAGGTTCAGACGCAGATGACTTTAGCAAACTAGGTTACGCAGCCTCTGTAACAATCTCTACTAGCCTGTTCAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
30b9afdedbcf05c4a6c2b5f836ba4aae3f847addad8a9822f3fbae9fe7a9cd9e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6364
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank