Protein

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Genbank accession
UXY92579.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,69
Protein sequence
MSLISTTIPNLVNGVSQQPYAMRLASQCQEQINAHSSVVEGLRKRPGTRHLAKLPNITGSLYVHTINRDAVEQYIVLIQNGNLRVFDLNGVEKTVTFPNGKTYLSSTNPAEEFRCVTVADYTFVLNTKVATKESTTLTASRPYEALAWVKQGAYGAKYYLTVDGKTASFSAPDGSQAAHVNQVTTDYIATQLTSGITSALGTGWSVVRYGSTIHIKRTDGASFTISSDDSIGDNGLEVIAQKAQRFSDLPARAIAGFTVEIVGDQSSSFDNYFVAYDTTGTGTTSGVWKETVKGGESVGFDSSTMPHALIRNADGTFTFKRLDWDQRKVGDLDSNPLPSFVGRPLNDIFFHRNRLGFISDENIVFSRSGEYFSFFRGTATTVLDTDPIDIGVSHVKVSILRHAVPFNETMLLFSDKTQFQLGTADVLTPDTISVNQTTEYECSLRAKPVGAGRYVYFAVNRGTFTGLREYYVDGETESEDAADITGHVPKYIPGGVFKIAASSNEDCVVVLSDEKRNCAWVYKYYWSNGEKLQSSWSRWEFHPDDQILNCDFIESRLYFVIRRSDGLHLEVINLEPGAIEANWNIAVHLDSMVTQARCTVAFVENDPALEADNVTQVTLPYKLRTGETVQLVTAPGGSRVPGFVVSDYTLDNTGTFSVLSFKGDWRGQPFYIGKPYTFRYRFSTLVIKEEAIGGGQLTIGEGRIQLRRMSVLYNNAGHFRAEVTPFRRDTYRYIFSGRVVGSGRNILGQVAIEEGKFSFPVMAKNDQVEIELVNDSYLPCFFLSAEWEAFYVIRSRRL
Physico‐chemical
properties
protein length:798 AA
molecular weight: 88631,38960 Da
isoelectric point:5,79760
aromaticity:0,11278
hydropathy:-0,21830

Domains

Domains [InterPro]
IPR058003
TTP
1–797
IPR058003
UXY92579.1
1 798
Architecture
TTP
TTP 1-797 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UXY92579.1
1 798
Domain Start End Length (AA) Confidence
N-terminal 1 130 130 0,9822
Central domain 131 329 200 0,3693
C-terminal 330 798 468 0,2429
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-130
Central
131-329
C-terminal
330-798

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage LUZ100
[NCBI] 		2973522 Uroviricota > Caudoviricetes > Autographivirales > Luzcentumvirus > Luzcentumvirus LUZ100
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UXY92579.1 [NCBI]
Genbank nucleotide accession
OP329100 [NCBI]
CDS location
range 22790 -> 25186
strand +
CDS
ATGAGCCTGATCTCCACGACCATTCCCAACTTGGTGAATGGGGTGAGTCAGCAGCCCTATGCGATGCGACTGGCCTCTCAATGCCAGGAGCAGATCAACGCCCACTCGTCCGTGGTCGAAGGGCTGCGGAAGCGCCCCGGTACTCGCCACCTCGCCAAGCTGCCCAACATCACCGGCAGCCTGTACGTCCACACCATCAACCGCGACGCGGTCGAGCAGTACATCGTCCTGATTCAGAACGGCAACCTGCGAGTGTTCGACCTGAACGGCGTTGAGAAGACCGTGACGTTCCCCAACGGCAAGACCTACCTGTCCTCGACCAACCCGGCTGAGGAGTTCCGGTGCGTCACCGTTGCGGACTACACCTTCGTGCTGAACACCAAGGTCGCCACCAAGGAATCCACCACGCTGACCGCAAGCCGTCCCTACGAGGCTCTGGCCTGGGTCAAGCAAGGCGCCTACGGTGCCAAGTACTACCTGACGGTCGACGGCAAGACGGCGAGCTTCTCGGCGCCTGACGGCTCCCAGGCTGCGCACGTCAACCAAGTCACCACCGACTACATCGCCACCCAGCTCACCAGCGGCATCACCTCTGCACTGGGCACCGGCTGGTCGGTTGTTCGGTACGGCTCGACGATCCACATCAAGCGCACCGATGGGGCCAGCTTCACGATCAGCTCCGATGACTCTATCGGGGACAACGGCCTGGAGGTGATTGCCCAGAAGGCCCAGCGGTTCTCCGATCTTCCGGCCAGGGCCATCGCTGGCTTCACGGTCGAGATCGTCGGTGACCAGTCGTCGTCCTTCGACAACTACTTCGTGGCCTATGACACCACCGGCACCGGCACCACTTCGGGTGTCTGGAAGGAAACCGTCAAGGGCGGCGAGTCGGTGGGCTTCGATTCCTCGACCATGCCCCATGCCCTGATCCGCAACGCTGACGGCACGTTCACCTTCAAGCGTCTCGACTGGGATCAGCGCAAGGTGGGCGATCTGGACAGTAACCCGCTGCCGTCCTTCGTGGGGCGACCGCTGAACGACATCTTCTTCCACCGCAACCGGCTGGGATTCATCAGCGACGAGAACATCGTCTTCTCCCGCTCGGGTGAGTACTTCAGCTTCTTCCGGGGCACGGCCACCACGGTGCTGGACACCGATCCCATCGACATCGGGGTATCCCACGTCAAGGTCTCGATCCTGCGCCATGCGGTGCCGTTCAACGAGACCATGCTGCTGTTCAGCGACAAGACGCAGTTCCAGCTCGGCACGGCTGACGTGCTCACGCCTGACACCATCTCGGTGAACCAGACGACCGAGTACGAGTGCTCCCTGCGAGCCAAGCCGGTGGGCGCCGGTCGGTACGTCTACTTCGCCGTCAACCGGGGCACCTTCACGGGGCTGCGGGAGTACTACGTCGACGGTGAGACTGAGTCCGAGGATGCGGCAGACATCACCGGCCATGTGCCCAAGTACATCCCAGGTGGGGTCTTCAAGATCGCCGCAAGCTCCAACGAGGACTGCGTGGTGGTGCTCTCCGACGAGAAGCGCAACTGCGCCTGGGTCTACAAGTACTACTGGAGCAACGGCGAGAAGCTGCAGTCCTCGTGGTCGCGCTGGGAGTTCCACCCCGATGACCAGATCCTCAACTGCGACTTCATCGAGTCGCGCCTGTACTTTGTCATCCGGCGAAGCGACGGGCTGCACCTTGAGGTGATCAACCTCGAACCCGGTGCGATTGAGGCCAACTGGAACATTGCCGTCCACCTCGACAGCATGGTCACCCAGGCCCGCTGCACGGTGGCCTTCGTGGAGAACGACCCGGCCCTGGAGGCGGACAACGTCACCCAGGTCACGCTGCCCTACAAGCTGCGCACCGGGGAGACCGTGCAACTGGTCACCGCGCCTGGAGGCTCCCGAGTTCCTGGCTTCGTGGTGAGCGACTACACCCTGGACAACACCGGGACGTTCTCGGTGCTGAGCTTCAAGGGTGACTGGCGGGGCCAGCCGTTCTACATCGGCAAGCCGTACACCTTCCGCTATCGGTTCTCCACCCTGGTGATCAAAGAGGAGGCCATCGGCGGGGGCCAGTTGACCATCGGTGAGGGCCGCATCCAGCTCCGCAGAATGTCGGTGCTCTACAACAACGCCGGGCACTTCCGGGCCGAGGTAACGCCGTTCCGCAGGGATACCTACAGGTACATCTTCTCGGGGCGTGTGGTCGGCTCCGGTCGGAACATCCTGGGCCAAGTGGCTATCGAGGAAGGCAAGTTCAGCTTCCCCGTCATGGCCAAGAACGATCAGGTCGAGATCGAGCTGGTCAACGACAGCTACCTCCCGTGCTTCTTCCTGAGCGCCGAATGGGAGGCGTTCTACGTCATTCGTTCAAGGAGACTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ca177da411c8ea3ffa67a29e24753baf3e97fc6eef0979cd19dec8c7be65abaa
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3449
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Transcriptomics-Driven Characterization of LUZ100, a T7-like Pseudomonas Phage with Temperate Features Putzeys,L., Poppeliers,J., Boon,M., Lood,C., Vallino,M. and Lavigne,R. 2023 36794936 GenBank